RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ADRB1P08588 477 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 DLDP09622 509 aaKnown RBP11.25□□□□□ -0.61
SF3A1-203ENST00000444440 C7P10643 843 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 CHRNB2P17787 502 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 ENGP17813 658 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 KCNA4P22459 653 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 EEF1GP26641 437 aaKnown RBP11.25□□□□□ -0.61
SF3A1-203ENST00000444440 CD6P30203 668 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 KRT9P35527 623 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 JAM2P57087 298 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 NOMO3P69849 1222 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SLC6A3Q01959 620 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 CENPCQ03188 943 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 NCAPHQ15003 741 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 RAB6CQ53S08 254 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 PITRM1Q5JRX3 1037 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 EFHC1Q5JVL4 640 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SPDYCQ5MJ68 293 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 IL31Q6EBC2 164 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SLC23A3Q6PIS1 610 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SLC26A9Q7LBE3 791 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 APTXQ7Z2E3 356 aaKnown RBP11.25□□□□□ -0.61
SF3A1-203ENST00000444440 C14orf80Q86SX3 495 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
SF3A1-203ENST00000444440 FAM124AQ86V42 546 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 OR2T3Q8NH03 318 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 EPS8L1Q8TE68 723 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 IGSF8Q969P0 613 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 TTC17Q96AE7 1141 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SIPA1Q96FS4 1042 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 BTN2A3PQ96KV6 586 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 GPR174Q9BXC1 333 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 RAB6CQ9H0N0 254 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 FAM204AQ9H8W3 233 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 CAPN10Q9HC96 672 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 PIGVQ9NUD9 493 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 ASNSD1Q9NWL6 643 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 DDIT4Q9NX09 232 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 NOCTQ9UK39 431 aaKnown RBP11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SNX10Q9Y5X0 201 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 PLXNB3Q9ULL4 1909 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 LRRK1Q38SD2 2015 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 SYNCRIPO60506 623 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 KCNK5O95279 499 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 ADCY5O95622 1261 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 CFIP05156 583 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 GLI1P08151 1106 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 POLR2EP19388 210 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 MZF1P28698 734 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 MAPK8P45983 427 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 GABRB2P47870 512 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 STK19P49842 368 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 POLR2FP61218 127 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 RPS14P62263 151 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 CDK17Q00537 523 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 ARID5AQ03989 594 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 NME3Q13232 169 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 CXorf57Q6NSI4 855 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 FBXL22Q6P050 247 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 CPA5Q8WXQ8 436 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 NPY6RQ99463 290 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 TRIM62Q9BVG3 475 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 NLRC4Q9NPP4 1024 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 TMEM9BQ9NQ34 198 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 FAM207AQ9NSI2 230 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 SERGEFQ9UGK8 458 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 ERVW-1Q9UQF0 538 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 HS3ST4Q9Y661 456 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 TDRD6O60522 2096 aaKnown RBP11.24□□□□□ -0.61
SF3A1-203ENST00000444440 AKAP13Q12802 2813 aa11.24□□□□□ -0.61
SF3A1-203ENST00000444440 MAP1BP46821 2468 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 TTC34A8MYJ7 566 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 F5H5T6 163 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 M0QYT0 321 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 SIN3BO75182 1162 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 NDUFS2O75306 463 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 GFPT2O94808 682 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 GJB6O95452 261 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 TPM2P07951 284 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 VAV1P15498 845 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF18P17022 549 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 PTMSP20962 102 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 ACSL1P33121 698 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 NOS2P35228 1153 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 FLT3P36888 993 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 COPB1P53618 953 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 RNASE9P60153 205 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 FMO1Q01740 532 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 BNC1Q01954 994 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 CDH18Q13634 790 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 AUHQ13825 339 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 DUOXA1Q1HG43 343 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms