RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 BTBD7Q9P203 1132 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 TPBGLP0DKB5 382 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 TRMT5Q32P41 509 aaKnown RBP22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 PACS2Q86VP3 889 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 FAM162AQ96A26 154 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 ADGRE3Q9BY15 652 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 SPDYE5A6NIY4 337 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 ERCC2P18074 760 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 MRPL45Q9BRJ2 306 aaKnown RBP22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 SIX2Q9NPC8 291 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 AAASQ9NRG9 546 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 GOLGA4Q13439 2230 aaKnown RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 EVPLLA8MZ36 301 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 UBDO15205 165 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 DCXO43602 365 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 PQBP1O60828 265 aaKnown RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 KPNA1P52294 538 aaPredicted RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 DSG1Q02413 1049 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 MAP2K5Q13163 448 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 KYAT3Q6YP21 454 aaKnown RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 BTBD10Q9BSF8 475 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 ZNF541Q9H0D2 1346 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 ALOX15BO15296 676 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 ERBB2P04626 1255 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 ZCCHC18P0CG32 403 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 DRD4P21917 467 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 ARL2P36404 184 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 TBL3Q12788 808 aaKnown RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 RRM2BQ7LG56 351 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 C18orf25Q96B23 403 aaPredicted RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 ZSCAN9O15535 394 aaPredicted RBP22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 AVILO75366 819 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 MTMR14Q8NCE2 650 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 RGS18Q9NS28 235 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 SNX13Q9Y5W8 968 aa22.9■■□□□ 1.26
CTDSPL-206ENST00000443503 NR5A2O00482 541 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 FSBPO95073 299 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 SPIRE1Q08AE8 756 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 C16orf87Q6PH81 154 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 LGI2Q8N0V4 545 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 TBL1YQ9BQ87 522 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 NIFKQ9BYG3 293 aaKnown RBP22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 CAAP1Q9H8G2 361 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 GOLGA2P5Q9HBQ8 144 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 MARCH2Q9P0N8 246 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 ZMYM2Q9UBW7 1377 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 ABCC13Q9NSE7 274 aa22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 ZNF214Q9UL59 606 aaPredicted RBP22.89■■□□□ 1.26
CTDSPL-206ENST00000443503 TPP1O14773 563 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 XPO1O14980 1071 aaKnown RBP22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 ADSSP30520 456 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 NEPROQ6NW34 567 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 UNC5AQ6ZN44 842 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 MYO1HQ8N1T3 1032 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 RAB42Q8N4Z0 105 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 RNF148Q8N7C7 305 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 C1orf127Q8N9H9 656 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 AJAP1Q9UKB5 411 aaPredicted RBP22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 USP2O75604 605 aaPredicted RBP22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 ATP4AP20648 1035 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 DUSP28Q4G0W2 176 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 YME1L1Q96TA2 773 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 RBBP8Q99708 897 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 LHX5Q9H2C1 402 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 ST3GAL5Q9UNP4 418 aa22.89■■□□□ 1.25
CTDSPL-206ENST00000443503 MEI4A8MW99 385 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 NFKB1P19838 968 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 MATKP42679 507 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 ZNF135P52742 658 aaPredicted RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 TTC27Q6P3X3 843 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 MON1BQ7L1V2 547 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 TMC7Q7Z402 723 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 KYQ8NBH2 561 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 ZNF555Q8NEP9 628 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 MAFBQ9Y5Q3 323 aaPredicted RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 SRRM3A6NNA2 597 aaPredicted RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 LRCH4O75427 683 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 MRPS6P82932 125 aaKnown RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 SPDYE7PQ495Y7 208 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 LZICQ8WZA0 190 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 CCT7Q99832 543 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 CDHR5Q9HBB8 845 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 PCDH18Q9HCL0 1135 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 NOCTQ9UK39 431 aaKnown RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 FAM32AQ9Y421 112 aaKnown RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 GPR25O00155 361 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 DYNC1I2Q13409 638 aaKnown RBP22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 ARHGAP15Q53QZ3 475 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 THAP11Q96EK4 314 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 CERS2Q96G23 380 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 NAGLUP54802 743 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 PDK4Q16654 411 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 SLC22A9Q8IVM8 553 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 PPTC7Q8NI37 304 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 IL22Q9GZX6 179 aa22.88■■□□□ 1.25
CTDSPL-206ENST00000443503 MMP13P45452 471 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 EPHB3P54753 998 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 RETSATQ6NUM9 610 aa22.87■■□□□ 1.25
CTDSPL-206ENST00000443503 TSHZ1Q6ZSZ6 1077 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms