RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TM9SF3Q9HD45 589 aa14.33□□□□□ -0.12
PTPRE-203ENST00000442830 FZD4Q9ULV1 537 aa14.33□□□□□ -0.12
PTPRE-203ENST00000442830 ANKRD6Q9Y2G4 727 aa14.33□□□□□ -0.12
PTPRE-203ENST00000442830 COL5A1P20908 1838 aaPredicted RBP14.33□□□□□ -0.12
PTPRE-203ENST00000442830 TARSL2A2RTX5 802 aaKnown RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 LRRC72A6NJI9 287 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 MED7O43513 233 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 TNFSF14O43557 240 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 DKK1O94907 266 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 APOEP02649 317 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 NNMTP40261 264 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 CSNK1EP49674 416 aaKnown RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 C21orf59P57076 290 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 RACK1P63244 317 aaKnown RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 LRMPQ12912 555 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 SLC12A1Q13621 1099 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 HNRNPA1L2Q32P51 320 aaKnown RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 FAM133BQ5BKY9 247 aaKnown RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 TTC39BQ5VTQ0 682 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 RNF219Q5W0B1 726 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 KIAA0895LQ68EN5 471 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 PMF1Q6P1K2 205 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 GANCQ8TET4 914 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 STK32AQ8WU08 396 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 BIRC7Q96CA5 298 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 PABPC3Q9H361 631 aaKnown RBP14.32□□□□□ -0.12
PTPRE-203ENST00000442830 SLC12A6Q9UHW9 1150 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 ADAMTS20P59510 1910 aa14.32□□□□□ -0.12
PTPRE-203ENST00000442830 APC2O95996 2303 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 EDDM13A0A1B0GTR0 161 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 VILLO15195 856 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 FSBPO95073 299 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 FGFR1OPO95684 399 aaKnown RBP14.31□□□□□ -0.12
PTPRE-203ENST00000442830 ADH1BP00325 375 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 CAPNS1P04632 268 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 NUDT1P36639 197 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 RPL34P49207 117 aaKnown RBP14.31□□□□□ -0.12
PTPRE-203ENST00000442830 RGS7P49802 495 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 NUCB2P80303 420 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 BNC1Q01954 994 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 SULT2A1Q06520 285 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 KIF19Q2TAC6 998 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 SLC45A4Q5BKX6 768 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 RFWD3Q6PCD5 774 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 ENOSF1Q7L5Y1 443 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 OR2T34Q8NGX1 318 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 FAM149B1Q96BN6 582 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 MED15Q96RN5 788 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 IL21RQ9HBE5 538 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 FBXL12Q9NXK8 326 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 TJP2Q9UDY2 1190 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 ITIH6Q6UXX5 1313 aa14.31□□□□□ -0.12
PTPRE-203ENST00000442830 A0A1W2PPC4 97 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 TRIM49BA6NDI0 452 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 CAPN9O14815 690 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 LUC7L3O95232 432 aaKnown RBP14.3□□□□□ -0.12
PTPRE-203ENST00000442830 SLC2A3P11169 496 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 BRD2P25440 801 aaKnown RBP14.3□□□□□ -0.12
PTPRE-203ENST00000442830 CD70P32970 193 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 CSKP41240 450 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 CTSKP43235 329 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 PMS1P54277 932 aaKnown RBP14.3□□□□□ -0.12
PTPRE-203ENST00000442830 MS4A13Q5J8X5 152 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 SLCO6A1Q86UG4 719 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 OXR1Q8N573 874 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 ZNF366Q8N895 744 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 PNPLA1Q8N8W4 532 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 ATP6V0D2Q8N8Y2 350 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
PTPRE-203ENST00000442830 TFAP2BQ92481 460 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 BTN2A3PQ96KV6 586 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 FCRL2Q96LA5 508 aaPredicted RBP14.3□□□□□ -0.12
PTPRE-203ENST00000442830 OMDQ99983 421 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 SCUBE2Q9NQ36 999 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 STIM2Q9P246 746 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 FTSJ1Q9UET6 329 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 PCDHGA1Q9Y5H4 931 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 SNX11Q9Y5W9 270 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 BAHCC1Q9P281 2608 aa14.3□□□□□ -0.12
PTPRE-203ENST00000442830 PLXNA2O75051 1894 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 MAGEC1O60732 1142 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 C1SP09871 688 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 C5AR1P21730 350 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 SLC6A4P31645 630 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 CCR5P51681 352 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 SGSHP51688 502 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 SNX16P57768 344 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 ECT2LQ008S8 904 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 BECN1Q14457 450 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 CST6Q15828 149 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 SND1Q7KZF4 910 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPRE-203ENST00000442830 DSG4Q86SJ6 1040 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 CARNMT1Q8N4J0 409 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 WFDC5Q8TCV5 224 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 SLC39A13Q96H72 371 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 LMLNQ96KR4 655 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 PRICKLE1Q96MT3 831 aaPredicted RBP14.29□□□□□ -0.12
PTPRE-203ENST00000442830 KDM4CQ9H3R0 1056 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms