RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SLC27A6Q9Y2P4 619 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 MYO18AQ92614 2054 aaKnown RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 IGLV3-10A0A075B6K4 115 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 A0A0U1RQJ8 604 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 DRGXA6NNA5 263 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 E9PAM4 449 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 RNF8O76064 485 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 APODP05090 189 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 IL1R2P27930 398 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 CD70P32970 193 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 MTA1Q13330 715 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 PIGHQ14442 188 aaPredicted RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 CA9Q16790 459 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 DGKKQ5KSL6 1271 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 RABGAP1LQ5R372 815 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 TXNRD3NBQ6F5E7 133 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 KIAA0907Q7Z7F0 614 aaPredicted RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 SUGP1Q8IWZ8 645 aaKnown RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 CCAR2Q8N163 923 aaKnown RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 CARNMT1Q8N4J0 409 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 OR52K2Q8NGK3 314 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 ATRIPQ8WXE1 791 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 SLC2A11Q9BYW1 496 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 CHRDQ9H2X0 955 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 ZDHHC4Q9NPG8 344 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 ABCB8Q9NUT2 735 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 POLR3BQ9NW08 1133 aaPredicted RBP16.54■□□□□ 0.24
USP39-205ENST00000442708 MPP6Q9NZW5 540 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 OR12D3Q9UGF7 316 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 IP6K2Q9UHH9 426 aa16.54■□□□□ 0.24
USP39-205ENST00000442708 TBC1D3BA6NDS4 549 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 GOLGA6L6A8MZA4 724 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 MYO1FO00160 1098 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 SRGAP2O75044 1071 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 RNF40O75150 1001 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 MTA2O94776 668 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 LUC7L3O95232 432 aaKnown RBP16.53■□□□□ 0.24
USP39-205ENST00000442708 HOXC13P31276 330 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 PCK1P35558 622 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 TNFRSF4P43489 277 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 KIR2DL1P43626 348 aaPredicted RBP16.53■□□□□ 0.24
USP39-205ENST00000442708 NRG1Q02297 640 aaPredicted RBP16.53■□□□□ 0.24
USP39-205ENST00000442708 LMAN2Q12907 356 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 LRRC32Q14392 662 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 GSE1Q14687 1217 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 ACAP1Q15027 740 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 TCEAL1Q15170 157 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 SPA17Q15506 151 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 ARL13BQ3SXY8 428 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 MFN1Q8IWA4 741 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 FIBINQ8TAL6 211 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 RFFLQ8WZ73 363 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 DESI2Q9BSY9 194 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 SNRNP25Q9BV90 132 aaKnown RBP16.53■□□□□ 0.24
USP39-205ENST00000442708 ZNF212Q9UDV6 495 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 SALL4Q9UJQ4 1053 aa16.53■□□□□ 0.24
USP39-205ENST00000442708 INTS6Q9UL03 887 aaKnown RBP16.53■□□□□ 0.24
USP39-205ENST00000442708 MUC22E2RYF6 1773 aaPredicted RBP16.53■□□□□ 0.24
USP39-205ENST00000442708 CACNA1IQ9P0X4 2223 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 NCAM2O15394 837 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 LRIG2O94898 1065 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 PROSCO94903 275 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 NUMBP49757 651 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 SLC25A11Q02978 314 aaKnown RBP16.52■□□□□ 0.24
USP39-205ENST00000442708 MTAPQ13126 283 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 FUT11Q495W5 492 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 C2orf27AQ580R0 203 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 CXorf57Q6NSI4 855 aaKnown RBP16.52■□□□□ 0.24
USP39-205ENST00000442708 ADIPOR2Q86V24 386 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 RHOT2Q8IXI1 618 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.52■□□□□ 0.24
USP39-205ENST00000442708 DTWD2Q8NBA8 298 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 USP33Q8TEY7 942 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 SORCS1Q8WY21 1168 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 EXOC4Q96A65 974 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 LACRTQ9GZZ8 138 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 GGA2Q9UJY4 613 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 USP18Q9UMW8 372 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 AP4E1Q9UPM8 1137 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 DUSP10Q9Y6W6 482 aa16.52■□□□□ 0.24
USP39-205ENST00000442708 A0A1B0GVM2 712 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 TYW5A2RUC4 315 aaKnown RBP16.51■□□□□ 0.23
USP39-205ENST00000442708 TCAF2A6NFQ2 919 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 H0Y626 953 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
USP39-205ENST00000442708 DESP17661 470 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 TIE1P35590 1138 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 TAS2R40P59535 323 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 CCZ1BP86790 482 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
USP39-205ENST00000442708 MESDQ14696 234 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 SMTNL2Q2TAL5 461 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 FBXO43Q4G163 708 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 EFHC2Q5JST6 749 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 ERMARDQ5T6L9 678 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 TTC39BQ5VTQ0 682 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms