RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SERPINI1Q99574 410 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 SEMA6AQ9H2E6 1030 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 AS3MTQ9HBK9 375 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 AFG3L2Q9Y4W6 797 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 ALOX15P16050 662 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 CDH8P55286 799 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 SP2Q02086 613 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 CEACAM7Q14002 265 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 C16orf72Q14CZ0 275 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF423Q2M1K9 1284 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 USP41Q3LFD5 358 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 SLC44A4Q53GD3 710 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 BNC2Q6ZN30 1099 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 CYP4V2Q6ZWL3 525 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 PTAR1Q7Z6K3 402 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 ERI1Q8IV48 349 aaKnown RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 PQLC3Q8N755 202 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 CATSPER1Q8NEC5 780 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 KLHL32Q96NJ5 620 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 TCHPQ9BT92 498 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 CAAP1Q9H8G2 361 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF232Q9UNY5 417 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 RNF11Q9Y3C5 154 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 FOXD2O60548 495 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 HSPA4LO95757 839 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 LDHAP00338 332 aaKnown RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 PDGFRBP09619 1106 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 PIK3R1P27986 724 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 TRPC3Q13507 836 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 EMC2Q15006 297 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 SLFN12LQ6IEE8 588 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 PACS1Q6VY07 963 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 ZSCAN18Q8TBC5 510 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-203ENST00000441443 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 LRRC39Q96DD0 335 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 FAM96AQ9H5X1 160 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 MOCS1Q9NZB8 636 aa20.79■□□□□ 0.92
SHOX2-203ENST00000441443 TFPTP0C1Z6 253 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 TFAMQ00059 246 aaKnown RBP20.78■□□□□ 0.92
SHOX2-203ENST00000441443 FAM47CQ5HY64 1035 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 EPGNQ6UW88 154 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 NAPRTQ6XQN6 538 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 ALDH16A1Q8IZ83 802 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 KYQ8NBH2 561 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 RCN3Q96D15 328 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 ATXN7L3BQ96GX2 97 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 ADPGKQ9BRR6 497 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 RRN3Q9NYV6 651 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 DCDC2Q9UHG0 476 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 HARS2P49590 506 aaKnown RBP20.78■□□□□ 0.92
SHOX2-203ENST00000441443 BSPRYQ5W0U4 402 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 CMC1Q7Z7K0 106 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 BBS5Q8N3I7 341 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 SMYD1Q8NB12 490 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 GPRASP2Q96D09 838 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 VPS33BQ9H267 617 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 ASNSD1Q9NWL6 643 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 C7orf72A4D263 438 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 H0YCG3 227 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 RNASEH2AO75792 299 aaKnown RBP20.78■□□□□ 0.92
SHOX2-203ENST00000441443 DPP6P42658 865 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 MAGEA3P43357 314 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 TRNP1Q6NT89 227 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 EME1Q96AY2 570 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 PPP1R14BQ96C90 147 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 SLC2A11Q9BYW1 496 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 CDH19Q9H159 772 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 ACAD9Q9H845 621 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 TCF7L2Q9NQB0 619 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 FAIMQ9NVQ4 179 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 EPS15L1Q9UBC2 864 aa20.78■□□□□ 0.92
SHOX2-203ENST00000441443 DOCK5Q9H7D0 1870 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 PSME4Q14997 1843 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 ENDOD1O94919 500 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 CPA3P15088 417 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 FGFR3P22607 806 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 IL4RP24394 825 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 TYK2P29597 1187 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 PRDX6P30041 224 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF699Q32M78 642 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 ANKDD1AQ495B1 522 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 PIGGQ5H8A4 983 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 STXBP5Q5T5C0 1151 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 ITPRIPL1Q6GPH6 555 aa20.77■□□□□ 0.92
SHOX2-203ENST00000441443 PIWIL1Q96J94 861 aaKnown RBP20.77■□□□□ 0.92
SHOX2-203ENST00000441443 CSPG5O95196 566 aa20.77■□□□□ 0.91
SHOX2-203ENST00000441443 ASPAP45381 313 aa20.77■□□□□ 0.91
SHOX2-203ENST00000441443 CDK9P50750 372 aaKnown RBP20.77■□□□□ 0.91
SHOX2-203ENST00000441443 ZFP1Q6P2D0 407 aa20.77■□□□□ 0.91
SHOX2-203ENST00000441443 C16orf89Q6UX73 402 aa20.77■□□□□ 0.91
SHOX2-203ENST00000441443 SLC4A11Q8NBS3 891 aa20.77■□□□□ 0.91
SHOX2-203ENST00000441443 PAIP2BQ9ULR5 123 aaKnown RBP20.77■□□□□ 0.91
SHOX2-203ENST00000441443 PRPF19Q9UMS4 504 aaKnown RBP20.77■□□□□ 0.91
SHOX2-203ENST00000441443 APOL1O14791 398 aa20.76■□□□□ 0.91
SHOX2-203ENST00000441443 PRPSAP2O60256 369 aa20.76■□□□□ 0.91
SHOX2-203ENST00000441443 ZNF23P17027 643 aa20.76■□□□□ 0.91
SHOX2-203ENST00000441443 RPL10P27635 214 aaKnown RBP20.76■□□□□ 0.91
SHOX2-203ENST00000441443 CCR3P51677 355 aa20.76■□□□□ 0.91
SHOX2-203ENST00000441443 CDH15P55291 814 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms