RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ENO1P06733 434 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SOX11P35716 441 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 BTKQ06187 659 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 LRRC23Q53EV4 343 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 ANKRD20A2Q5SQ80 823 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 ANKRD20A1Q5TYW2 823 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 CES3Q6UWW8 571 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 C15orf39Q6ZRI6 1047 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 LZTR1Q8N653 840 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC26A7Q8TE54 656 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 HNRNPABQ99729 332 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 FICDQ9BVA6 458 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SDCBP2Q9H190 292 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 MANSC1Q9H8J5 431 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 RAMP2O60895 175 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 DAB1O75553 588 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 PYGBP11216 843 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 NFKBIAP25963 317 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 ADRA1BP35368 520 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 TUFMP49411 452 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 GBE1Q04446 702 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 AUHQ13825 339 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 POU6F1Q14863 301 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 RABGAP1LQ5R372 815 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 CALML6Q8TD86 181 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 BCO2Q9BYV7 579 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 ATXN3LQ9H3M9 355 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 ENDOD1O94919 500 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 GNRH1P01148 92 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 NUDT17P0C025 328 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 PAX3P23760 479 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 OR1E1P30953 314 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 LBX1P52954 281 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 GPR152Q8TDT2 470 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 EMID1Q96A84 441 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 E2F7Q96AV8 911 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 PTPN18Q99952 460 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 WWP1Q9H0M0 922 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 HIPK3Q9H422 1215 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 LOC100653049A0A140TA62 436 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 WDR27A2RRH5 827 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 KRT34O76011 436 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 TCF4P15884 667 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 SELPP16109 830 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 PSMB4P28070 264 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 NDUFV1P49821 464 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 NOMO1Q15155 1222 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 KBTBD12Q3ZCT8 623 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 TXNRD3NBQ6F5E7 133 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 ATAD1Q8NBU5 361 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 DBF4BQ8NFT6 615 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 TEKT4Q8WW24 435 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 FAM96AQ9H5X1 160 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 OLA1Q9NTK5 396 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 BCAP29Q9UHQ4 241 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 TRHDEQ9UKU6 1024 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 GOLGA8QA0A0J9YX86 632 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 GOLGA8OA6NCC3 632 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 GOLGA8NF8WBI6 632 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 ATP5HO75947 161 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 RENBPP51606 427 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 EPHB3P54753 998 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 MGAT5Q09328 741 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC12A1Q13621 1099 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 CHI3L2Q15782 390 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 ARHGAP17Q68EM7 881 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 LRRC8DQ7L1W4 858 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 LCA5Q86VQ0 697 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 PLD5Q8N7P1 536 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 CLEC4CQ8WTT0 213 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 CSPG4P5Q96PW8 444 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 BRD8Q9H0E9 1235 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 NSMCE4AQ9NXX6 385 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 SFMBT1Q9UHJ3 866 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
TRAPPC9-202ENST00000438773 SPECC1L-ADORA2AF8WAN1 911 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 NEMP1O14524 444 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 CHADO15335 359 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ADCY6O43306 1168 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 NDUFS3O75489 264 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 KRT16P08779 473 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 VEGFBP49765 207 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZNF135P52742 658 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 RABGGTBP53611 331 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms