RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SYBUQ9NX95 663 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 SLC17A6Q9P2U8 582 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 E7ENQ6 273 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 DIAPH2O60879 1101 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 GLRA3O75311 464 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 IFRD2Q12894 506 aaPredicted RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 MFSD14CQ5VZR4 134 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 PDZD4Q76G19 769 aaPredicted RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 TTC7BQ86TV6 843 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 CRLF3Q8IUI8 442 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 ARID3BQ8IVW6 561 aaPredicted RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 PGAP3Q96FM1 320 aaPredicted RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 RSRC1Q96IZ7 334 aaKnown RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 NMUR2Q9GZQ4 415 aa19.08■□□□□ 0.65
CLK1-205ENST00000434813 DENND2DQ9H6A0 471 aaPredicted RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 PIH1D1Q9NWS0 290 aaKnown RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 HBS1LQ9Y450 684 aaKnown RBP19.08■□□□□ 0.65
CLK1-205ENST00000434813 TPP1O14773 563 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 CAPN9O14815 690 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 TOP3BO95985 862 aaKnown RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 IGHA2P01877 340 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 ATP5BP06576 529 aaKnown RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 LHX1P48742 406 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 HCAR3P49019 387 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 HTRA3P83110 453 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 PURAQ00577 322 aaKnown RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 HSF5Q4G112 596 aaPredicted RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 RAB41Q5JT25 222 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 ALYREFQ86V81 257 aaKnown RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 SMOQ99835 787 aa19.08■□□□□ 0.64
CLK1-205ENST00000434813 NKX1-2Q9UD57 310 aaPredicted RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 COL4A4P53420 1690 aaPredicted RBP19.08■□□□□ 0.64
CLK1-205ENST00000434813 YJEFN3A6XGL0 299 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 FAM72CH0Y354 149 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 NCAM2O15394 837 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 AP1G2O75843 785 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 GSRP00390 522 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 POLBP06746 335 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 ERCC2P18074 760 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 IGFBP6P24592 240 aaPredicted RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 NOGQ13253 232 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 SPANXN3Q5MJ09 141 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 FAM72AQ5TYM5 149 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 FAM72DQ6L9T8 149 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 FAM72BQ86X60 149 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 TP53INP2Q8IXH6 220 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 GSTCDQ8NEC7 633 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 N4BP2L2Q92802 583 aaPredicted RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 ANKRD27Q96NW4 1050 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 SIKE1Q9BRV8 207 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 ARHGAP39Q9C0H5 1083 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 THAP1Q9NVV9 213 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 EMCNQ9ULC0 261 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 PTCH2Q9Y6C5 1203 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 MYO18AQ92614 2054 aaKnown RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 DUSP11O75319 330 aaKnown RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 ITGA2BP08514 1039 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 C6orf222P0C671 652 aaPredicted RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 RARBP10826 455 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 GNAZP19086 355 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 PTPN3P26045 913 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 MLH1P40692 756 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 TPI1P60174 286 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 MRPS6P82932 125 aaKnown RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 PPIDQ08752 370 aaKnown RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 STX3Q13277 289 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 PDE1CQ14123 709 aaPredicted RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 INTS6LQ5JSJ4 861 aaKnown RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 BSPRYQ5W0U4 402 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 C4orf50Q6ZRC1 276 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 GPRIN1Q7Z2K8 1008 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 RASSF3Q86WH2 238 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 ZMIZ2Q8NF64 920 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 ATP2A3Q93084 1043 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 CERS2Q96G23 380 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 PCED1BQ96HM7 432 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 NUDCD1Q96RS6 583 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 GORASP1Q9BQQ3 440 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 ANLNQ9NQW6 1124 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 RRN3Q9NYV6 651 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 KLHL8Q9P2G9 620 aaPredicted RBP19.07■□□□□ 0.64
CLK1-205ENST00000434813 FBXW11Q9UKB1 542 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 PSAT1Q9Y617 370 aa19.07■□□□□ 0.64
CLK1-205ENST00000434813 MEIS3P2A8K0S8 358 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 CAPN14A8MX76 684 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 I6L893 689 aaPredicted RBP19.06■□□□□ 0.64
CLK1-205ENST00000434813 KCNK1O00180 336 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 GYG2O15488 501 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 GSC2O15499 205 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 TPBGLP0DKB5 382 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 ESRRAP11474 423 aaPredicted RBP19.06■□□□□ 0.64
CLK1-205ENST00000434813 FASTKD1Q53R41 847 aaKnown RBP19.06■□□□□ 0.64
CLK1-205ENST00000434813 MBLAC2Q68D91 279 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 PID1Q7Z2X4 250 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 ADAM32Q8TC27 787 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 C20orf27Q9GZN8 174 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 BRD8Q9H0E9 1235 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 MMADHCQ9H3L0 296 aaPredicted RBP19.06■□□□□ 0.64
CLK1-205ENST00000434813 FAM105AQ9NUU6 356 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 ZFATQ9P243 1243 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms