RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 C7orf57Q8NEG2 295 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 NR4A3Q92570 626 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 PMM1Q92871 262 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 SNX27Q96L92 541 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 FSCN3Q9NQT6 498 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 DDX21Q9NR30 783 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPN4-205ENST00000433888 HIF1ANQ9NWT6 349 aa4.26□□□□□ -1.73
PTPN4-205ENST00000433888 WDR81Q562E7 1941 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 A0A1W2PPC4 97 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 LOC105371045A0A1W2PR82 267 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 NPC1O15118 1278 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 TGM2P21980 687 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 CASP5P51878 434 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 RRP1P56182 461 aaKnown RBP4.25□□□□□ -1.73
PTPN4-205ENST00000433888 TRAF1Q13077 416 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 ARHGAP15Q53QZ3 475 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 KDELC2Q7Z4H8 507 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 C14orf80Q86SX3 495 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 TTC8Q8TAM2 541 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 GRAMD1AQ96CP6 724 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 COLEC11Q9BWP8 271 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 TXNRD2Q9NNW7 524 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 PRDM11Q9NQV5 511 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 NCKIPSDQ9NZQ3 722 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 MYO6Q9UM54 1294 aa4.25□□□□□ -1.73
PTPN4-205ENST00000433888 GOLGA6CA6NDK9 693 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 GOLGA6BA6NDN3 693 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 POM121BA6NF01 834 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 RGS14O43566 566 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 VIPP01282 170 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 LCATP04180 440 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 GOLGA6DP0CG33 693 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 IGFBP2P18065 325 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 RPL36AP83881 106 aaKnown RBP4.24□□□□□ -1.73
PTPN4-205ENST00000433888 CRYZQ08257 329 aaKnown RBP4.24□□□□□ -1.73
PTPN4-205ENST00000433888 BEND5Q7L4P6 421 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 MORC1Q86VD1 984 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 ADGRF3Q8IZF5 1079 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 GLIS1Q8NBF1 620 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 CCDC150Q8NCX0 1101 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 SRFBP1Q8NEF9 429 aaKnown RBP4.24□□□□□ -1.73
PTPN4-205ENST00000433888 JDP2Q8WYK2 163 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 EIF3CQ99613 913 aaKnown RBP4.24□□□□□ -1.73
PTPN4-205ENST00000433888 DCLK3Q9C098 648 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 MAGEH1Q9H213 219 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 RMI1Q9H9A7 625 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 GOLGA6AQ9NYA3 693 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 TBC1D14Q9P2M4 693 aa4.24□□□□□ -1.73
PTPN4-205ENST00000433888 G3BP2Q9UN86 482 aaKnown RBP4.24□□□□□ -1.73
PTPN4-205ENST00000433888 A0A1B0GUV1 79 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 NEURL1O76050 574 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 PPP1R3DO95685 299 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 NDST3O95803 873 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 S100BP04271 92 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-205ENST00000433888 CPA1P15085 419 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-205ENST00000433888 GAS1P54826 345 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 ABATP80404 500 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 SHC2P98077 582 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 GPS2Q13227 327 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 GSG1LQ6UXU4 331 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 FAM83HQ6ZRV2 1179 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-205ENST00000433888 SLC16A12Q6ZSM3 486 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 CYB5R4Q7L1T6 521 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 NR2C2APQ86WQ0 139 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPN4-205ENST00000433888 MAN2B2Q9Y2E5 1009 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 UBE2J1Q9Y385 318 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-205ENST00000433888 PTGDR2Q9Y5Y4 395 aa4.23□□□□□ -1.73
PTPN4-205ENST00000433888 LOC105369274A0A096LPK9 316 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 LOC102723532A0A0G2JNH3 316 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 A0A1B0GVT2 93 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 OR6C75A6NL08 312 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 KPNA5O15131 536 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 SPRY3O43610 288 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 PQBP1O60828 265 aaKnown RBP4.22□□□□□ -1.73
PTPN4-205ENST00000433888 TAF5LO75529 589 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 GAS8-AS1O95177 125 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 NFATC1O95644 943 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 ITGA5P08648 1049 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 ARSBP15848 533 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 KCNJ4P48050 445 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 PCYT1AP49585 367 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 NSUN2Q08J23 767 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPN4-205ENST00000433888 CBFBQ13951 182 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 SHBQ15464 509 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 MAPKAPK3Q16644 382 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 P3H1Q32P28 736 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 GFI1BQ5VTD9 330 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 PRSS57Q6UWY2 283 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 Q6ZTK2 550 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 KRT27Q7Z3Y8 459 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 OR4N4Q8N0Y3 316 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 ENGASEQ8NFI3 743 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 SLC22A17Q8WUG5 538 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 TSR2Q969E8 191 aaKnown RBP4.22□□□□□ -1.73
PTPN4-205ENST00000433888 SEZ6LQ9BYH1 1024 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 SFXN1Q9H9B4 322 aa4.22□□□□□ -1.73
PTPN4-205ENST00000433888 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms