RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CXCL10P02778 98 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 GALTP07902 379 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 CCR1P32246 355 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 UNC5AQ6ZN44 842 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 HAPLN3Q96S86 360 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 SMC6Q96SB8 1091 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 EBNA1BP2Q99848 306 aaKnown RBP20.1■□□□□ 0.81
VRK2-205ENST00000432057 FBXO44Q9H4M3 255 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 EIF2B3Q9NR50 452 aaKnown RBP20.1■□□□□ 0.81
VRK2-205ENST00000432057 MAD1L1Q9Y6D9 718 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 MTMR11A4FU01 709 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 PRPF4O43172 522 aaKnown RBP eCLIP20.09■□□□□ 0.81
VRK2-205ENST00000432057 VNN2O95498 520 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 MOCS2O96007 188 aaPredicted RBP20.09■□□□□ 0.81
VRK2-205ENST00000432057 GARSP41250 739 aaKnown RBP20.09■□□□□ 0.81
VRK2-205ENST00000432057 SARNPP82979 210 aaKnown RBP20.09■□□□□ 0.81
VRK2-205ENST00000432057 PARP6Q2NL67 630 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 TAS1R1Q7RTX1 841 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 PID1Q7Z2X4 250 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 MON1AQ86VX9 555 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 SLC44A1Q8WWI5 657 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 TMEM175Q9BSA9 504 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 CRISPLD1Q9H336 500 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 PIH1D1Q9NWS0 290 aaKnown RBP20.09■□□□□ 0.81
VRK2-205ENST00000432057 IGSF9Q9P2J2 1179 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 SLC27A5Q9Y2P5 690 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 COL4A6Q14031 1691 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 VIMP08670 466 aaKnown RBP20.09■□□□□ 0.81
VRK2-205ENST00000432057 MX2P20592 715 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 CDK16Q00536 496 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 FAAP100Q0VG06 881 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 ZBTB17Q13105 803 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 PPP2R5DQ14738 602 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 TRIM60Q495X7 471 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 SLC39A5Q6ZMH5 540 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 RNF19BQ6ZMZ0 732 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 ANKRD33Q7Z3H0 272 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 CKAP2Q8WWK9 683 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 SERPINB11Q96P15 392 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 GORASP1Q9BQQ3 440 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 WBP1LQ9NX94 342 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 MRPL42Q9Y6G3 142 aaKnown RBP20.09■□□□□ 0.81
VRK2-205ENST00000432057 LTBP2Q14767 1821 aa20.09■□□□□ 0.81
VRK2-205ENST00000432057 APOEP02649 317 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 ARTNQ5T4W7 220 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 MANEALQ5VSG8 457 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 MSANTD2Q6P1R3 559 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 LRRC8BQ6P9F7 803 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 PRSS55Q6UWB4 352 aaPredicted RBP20.08■□□□□ 0.81
VRK2-205ENST00000432057 LRRC43Q8N309 656 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 FCRL2Q96LA5 508 aaPredicted RBP20.08■□□□□ 0.81
VRK2-205ENST00000432057 SEPT5Q99719 369 aaPredicted RBP20.08■□□□□ 0.81
VRK2-205ENST00000432057 BRD8Q9H0E9 1235 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 SMYD2Q9NRG4 433 aa20.08■□□□□ 0.81
VRK2-205ENST00000432057 MYLKQ15746 1914 aa20.08■□□□□ 0.8
VRK2-205ENST00000432057 CXorf49A8MYA2 514 aaPredicted RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 TBC1D4O60343 1298 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 ZNF189O75820 626 aaPredicted RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 UPP2O95045 317 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 INHBAP08476 426 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 MLNP12872 115 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 HOXC13P31276 330 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 MNX1P50219 401 aaPredicted RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 WDR4P57081 412 aaKnown RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 CRADDP78560 199 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 TLE2Q04725 743 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 ELAVL2Q12926 359 aaKnown RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 GPR17Q13304 367 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 SPARCL1Q14515 664 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 MGAT5BQ3V5L5 792 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.07■□□□□ 0.8
VRK2-205ENST00000432057 CTAGE3PQ8IX95 158 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 PPM1NQ8N819 430 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 FBXO32Q969P5 355 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 TBC1D31Q96DN5 1066 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 SEC16BQ96JE7 1060 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 SMG5Q9UPR3 1016 aaKnown RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 RRP15Q9Y3B9 282 aaKnown RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 PCDHA11Q9Y5I1 949 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 HS3ST4Q9Y661 456 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 IKBKGQ9Y6K9 419 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 WDR27A2RRH5 827 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 KCNU1A8MYU2 1149 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 TCP11X1B4DZS4 312 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 ZBTB24O43167 697 aaPredicted RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 TYROBPO43914 113 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 FAM155BO75949 473 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 GSTA2P09210 222 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 KRT4P19013 534 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 CA4P22748 312 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 PRKCHP24723 683 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 YWHAQP27348 245 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 RPA3P35244 121 aaPredicted RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 SESN2P58004 480 aaPredicted RBP20.07■□□□□ 0.8
VRK2-205ENST00000432057 OLIG2Q13516 323 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 SRLQ86TD4 932 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 ARHGAP18Q8N392 663 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 GSDMBQ8TAX9 411 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 SPPL2BQ8TCT7 592 aa20.07■□□□□ 0.8
VRK2-205ENST00000432057 DENND1AQ8TEH3 1009 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms