RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FAM84BQ96KN1 310 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 UROC1Q96N76 676 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 C1QTNF7Q9BXJ2 289 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 TRIM15Q9C019 465 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 TMEM206Q9H813 350 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 COPS7BQ9H9Q2 264 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 PKD2L2Q9NZM6 624 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 LRP2BPQ9P2M1 347 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC17A7Q9P2U7 560 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 COG5Q9UP83 839 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 E5RJQ4 531 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ERVH48-1M5A8F1 160 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 EML1O00423 815 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 YKT6O15498 198 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 GAS7O60861 476 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 LRRN2O75325 713 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 EPN2O95208 641 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 NADKO95544 446 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 PAHP00439 452 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 MYL4P12829 197 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 BTF3P20290 206 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CALML3P27482 149 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 GSTM2P28161 218 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CASP3P42574 277 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 HAAOP46952 286 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 MARCKSL1P49006 195 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 IFITM3Q01628 133 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 DNASE1L3Q13609 305 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 TAF5Q15542 800 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 PXDC1Q5TGL8 231 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 C15orf52Q6ZUT6 534 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 PAF1Q8N7H5 531 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 FNIP1Q8TF40 1166 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 TTC17Q96AE7 1141 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ARHGEF26Q96DR7 871 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SYT11Q9BT88 431 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 RAD21L1Q9H4I0 556 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 NARFLQ9H6Q4 476 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 UCKL1Q9NWZ5 548 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 NPAP1Q9NZP6 1156 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 NXF1Q9UBU9 619 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CAB39Q9Y376 341 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 TNRC6CQ9HCJ0 1690 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 KIAA1551Q9HCM1 1747 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CNTNAP4Q9C0A0 1308 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 LAMB1P07942 1786 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CYP2D7A0A087X1C5 515 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 MAGEB16A2A368 324 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 S100A6P06703 90 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ICAM2P13598 275 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RRM1P23921 792 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 EVI2BP34910 448 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 STAT1P42224 750 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 AQP5P55064 265 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 MLLT10P55197 1068 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 COASYQ13057 564 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 LAPTM5Q13571 262 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 UBAP2LQ14157 1087 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 SQLEQ14534 574 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 IGSF11Q5DX21 431 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 CYP20A1Q6UW02 462 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 BTLAQ7Z6A9 289 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ARID3BQ8IVW6 561 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 TCAIMQ8N3R3 496 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 TOE1Q96GM8 510 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RILPQ96NA2 401 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 PKP2Q99959 881 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 C17orf62Q9BQA9 187 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 DHRS4Q9BTZ2 278 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RHOBTB2Q9BYZ6 727 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ATP13A3Q9H7F0 1226 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 PLEKHA5Q9HAU0 1116 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ATP6V1HQ9UI12 483 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 VPS28Q9UK41 221 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 SBF2Q86WG5 1849 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 TAF1LQ8IZX4 1826 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 IRS2Q9Y4H2 1338 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ATP6V1G2-DDX39BF2Z307 99 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 LPXNO60711 386 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RNASEH2AO75792 299 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 FGRP09769 529 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ACTN1P12814 892 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 GYS1P13807 737 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC9A1P19634 815 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RBL1P28749 1068 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 PPP4CP60510 307 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 DYNLL1P63167 89 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 PDIA2Q13087 525 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 FSCBQ5H9T9 825 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RSBN1Q5VWQ0 802 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC51AQ86UW1 340 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC22A16Q86VW1 577 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms