RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PTPN7P35236 360 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC16A2P36021 539 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 IL6STP40189 918 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TECP42680 631 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CPA2P48052 419 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 LEPRP48357 1165 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC9A3P48764 834 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CLK2P49760 499 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KPNA1P52294 538 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 GABARAPL2P60520 117 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNRPFP62306 86 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARHGAP8P85298 464 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PPP2R2BQ00005 443 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 MPP1Q00013 466 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 MYL7Q01449 175 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TNFAIP2Q03169 654 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRAF2Q12933 501 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ART3Q13508 389 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 INPP5AQ14642 412 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DRAP1Q14919 205 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SIX1Q15475 284 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CYP2A13Q16696 494 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DUSP7Q16829 419 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PROSER3Q2NL68 480 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZFP69Q49AA0 526 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 C4orf48Q5BLP8 95 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 HABP4Q5JVS0 413 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 C6orf52Q5T4I8 152 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANGEL2Q5VTE6 544 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RSBN1Q5VWQ0 802 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANKRD26P1Q6NSI1 321 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RINT1Q6NUQ1 792 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 UGT3A1Q6NUS8 523 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NEK5Q6P3R8 708 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 GALNT18Q6P9A2 607 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM72Q6ZMU5 477 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KIAA0408Q6ZU52 694 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RFX8Q6ZV50 586 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 USP43Q70EL4 1123 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DYMQ7RTS9 669 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TFAP2DQ7Z6R9 452 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRUNE1Q86TP1 453 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ALYREFQ86V81 257 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 IGFN1Q86VF2 1251 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARHGEF19Q8IW93 802 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLFN12Q8IYM2 578 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KATNAL2Q8IYT4 538 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RCOR2Q8IZ40 523 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TCAIMQ8N3R3 496 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SFRP1Q8N474 314 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM109AQ8N4B1 249 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SVOPQ8N4V2 548 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 FIBCD1Q8N539 461 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC25A41Q8N5S1 370 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 LNX1Q8TBB1 728 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 HCAR2Q8TDS4 363 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 LRRC39Q96DD0 335 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ASB9Q96DX5 294 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DUS3LQ96G46 650 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC39A13Q96H72 371 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAR2Q96K12 515 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CNDP1Q96KN2 507 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DACH2Q96NX9 599 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDK15Q96Q40 435 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRAF4Q9BUZ4 470 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NUP85Q9BW27 656 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ACAT2Q9BWD1 397 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KLF16Q9BXK1 252 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TEX13BQ9BXU2 312 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC7A5P2Q9GIP4 190 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CLPBQ9H078 707 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TMEM168Q9H0V1 697 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRPV6Q9H1D0 765 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KCTD10Q9H3F6 313 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 MUC13Q9H3R2 512 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 GOLPH3Q9H4A6 298 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 SYTL2Q9HCH5 934 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RAVER2Q9HCJ3 691 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TM9SF3Q9HD45 589 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 FBXO8Q9NRD0 319 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RAB20Q9NX57 234 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DDX56Q9NY93 547 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARMCX1Q9P291 453 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KANSL3Q9P2N6 904 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRPC5Q9UL62 973 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 VPS4AQ9UN37 437 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 GRIP1Q9Y3R0 1128 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NR2E1Q9Y466 385 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 COL1A1P02452 1464 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PXDNQ92626 1479 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 MYH3P11055 1940 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NUP188Q5SRE5 1749 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRR36Q9H6K5 1346 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF142P52746 1687 aaPredicted RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 MAGEB6P1A0A0J9YX57 407 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM237BA0A1B0GVD1 139 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 WDR91A4D1P6 747 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 RGSL1A5PLK6 1076 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRPC5OSA6NMA1 111 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 KPNA7A9QM74 516 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms