RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CCL22O00626 93 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 BUD23O43709 281 aaKnown RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 TSPAN3O60637 253 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 DLDP09622 509 aaKnown RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 VDRP11473 427 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 AP2B1P63010 937 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 TMEM198Q66K66 360 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SPATA24Q86W54 205 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 ALKBH8Q96BT7 664 aaKnown RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 CATSPER2Q96P56 530 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 FOXP3Q9BZS1 431 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 SYBUQ9NX95 663 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 TMEM216Q9P0N5 145 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SLC7A8Q9UHI5 535 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 PMPCBO75439 489 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SMNDC1O75940 238 aaKnown RBP eCLIP13.73□□□□□ -0.21
USP42-203ENST00000426246 TM4SF4P48230 202 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SLC8A3P57103 927 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 POU6F1Q14863 301 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SOWAHAQ2M3V2 549 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 CERCAMQ5T4B2 595 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 CAND1Q86VP6 1230 aaKnown RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 INPP5DQ92835 1189 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 FERMT1Q9BQL6 677 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 C2orf40Q9H1Z8 148 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 PLLPQ9Y342 182 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 CILPO75339 1184 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
USP42-203ENST00000426246 INHBEP58166 350 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 BLMHQ13867 455 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SURF1Q15526 300 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 MMEL1Q495T6 779 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 IPMKQ8NFU5 416 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 CNBD2Q96M20 576 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 ZNF518BQ9C0D4 1074 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 SEMA6AQ9H2E6 1030 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 WDR35Q9P2L0 1181 aa13.73□□□□□ -0.21
USP42-203ENST00000426246 KIF3CO14782 793 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 KIF1CO43896 1103 aaKnown RBP13.72□□□□□ -0.21
USP42-203ENST00000426246 JCHAINP01591 159 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 NCAM1P13591 858 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 CD1EP15812 388 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 MRPS22P82650 360 aaKnown RBP13.72□□□□□ -0.21
USP42-203ENST00000426246 IRF9Q00978 393 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 CAP1Q01518 475 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 PHTF2Q8N3S3 785 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 OR6J1Q8NGC5 347 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 TFB1MQ8WVM0 346 aaKnown RBP13.72□□□□□ -0.21
USP42-203ENST00000426246 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 CLIC5Q9NZA1 410 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 STX16-NPEPL1H3BU86 382 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 SPTLC1O15269 473 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
USP42-203ENST00000426246 RALBP11234 206 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 ARSAP15289 507 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 BOLA3Q53S33 107 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 LRRC38Q5VT99 294 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 KBTBD2Q8IY47 623 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 PQLC3Q8N755 202 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 GSDMBQ8TAX9 411 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 RAB3IL1Q8TBN0 382 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 XPNPEP3Q9NQH7 507 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 TLK1Q9UKI8 766 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 ANGPTL2Q9UKU9 493 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 ATP6AP2A0A1C7CYW4 349 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
USP42-203ENST00000426246 C2CD4BA6NLJ0 364 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 MFSD11O43934 449 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 ATP6AP2O75787 350 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 CSPG5O95196 566 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
USP42-203ENST00000426246 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 SLC12A1Q13621 1099 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 FAM187BQ17R55 369 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 PPM1LQ5SGD2 360 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 HTR3CQ8WXA8 447 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 APBA2Q99767 749 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 RHOBTB2Q9BYZ6 727 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 CHST12Q9NRB3 414 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 TEX264Q9Y6I9 313 aa13.72□□□□□ -0.21
USP42-203ENST00000426246 TCEA3O75764 348 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 F2P00734 622 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 ANPEPP15144 967 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 TGM2P21980 687 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 COPAP53621 1224 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.21
USP42-203ENST00000426246 KCNK13Q9HB14 408 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 DDX18Q9NVP1 670 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms