RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ARFGAP2Q8N6H7 521 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 NPWQ8N729 165 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 ATP6V0D2Q8N8Y2 350 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 CCNYQ8ND76 341 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 GIPC2Q8TF65 315 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 PYROXD1Q8WU10 500 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 MYRFLQ96LU7 910 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 VAT1Q99536 393 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 SIK2Q9H0K1 926 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 CENPHQ9H3R5 247 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 LRRC4CQ9HCJ2 640 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 DONSONQ9NYP3 566 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 MARCH2Q9P0N8 246 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 IGSF9Q9P2J2 1179 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 PCDHB12Q9Y5F1 795 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 HS3ST4Q9Y661 456 aa14.83□□□□□ -0.04
CDK3-201ENST00000425876 E7EVH7 732 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 RNF103O00237 685 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 C2CD2LO14523 706 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 RGS16O15492 202 aaPredicted RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 GJB5O95377 273 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 METTL18O95568 372 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 FGBP02675 491 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 NR1D1P20393 614 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 GARSP41250 739 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 GAD2Q05329 585 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 WASHC5Q12768 1159 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 FASTKD3Q14CZ7 662 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 PARP6Q2NL67 630 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 MSS51Q4VC12 460 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 C10orf120Q5SQS8 335 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 KLHDC10Q6PID8 442 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 C16orf59Q7L2K0 433 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 OTOP2Q7RTS6 562 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 LRRC49Q8IUZ0 686 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 C7orf61Q8IZ16 206 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 RIBC1Q8N443 379 aaPredicted RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 ATP11CQ8NB49 1132 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 UHMK1Q8TAS1 419 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 LRRC39Q96DD0 335 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 TRMT2BQ96GJ1 504 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 BTN2A3PQ96KV6 586 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 TSGA13Q96PP4 275 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 EIF2B3Q9NR50 452 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 PPARGC1AQ9UBK2 798 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 NOVA2Q9UNW9 492 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 SSX2IPQ9Y2D8 614 aa14.82□□□□□ -0.04
CDK3-201ENST00000425876 HBS1LQ9Y450 684 aaKnown RBP14.82□□□□□ -0.04
CDK3-201ENST00000425876 E9PAM4 449 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TLR5O60602 858 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 SPAG6O75602 509 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 SEC24AO95486 1093 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 APRTP07741 180 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 SRGAP2BP0DMP2 458 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 PHBP35232 272 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 ALDH1A3P47895 512 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 SARNPP82979 210 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 AUHQ13825 339 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 RASA2Q15283 850 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 CCDC38Q502W7 563 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 RWDD4Q6NW29 188 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 TDRPQ86YL5 185 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 CCDC13Q8IYE1 715 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TCEAL8Q8IYN2 117 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 ZNF683Q8IZ20 524 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TAB3Q8N5C8 712 aaPredicted RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 CCDC33Q8N5R6 958 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 EPS8L3Q8TE67 593 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 LRRN4Q8WUT4 740 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 RXFP1Q9HBX9 757 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 XAB2Q9HCS7 855 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 MRPL17Q9NRX2 175 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK3-201ENST00000425876 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 FETUBQ9UGM5 382 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 LGALS13Q9UHV8 139 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TRHDEQ9UKU6 1024 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TEX264Q9Y6I9 313 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 IGLV3-10A0A075B6K4 115 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TLDC2A0PJX2 215 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 LILRB3O75022 631 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 CDH16O75309 829 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TBX18O95935 607 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 MLNP12872 115 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 HMGA1P17096 107 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 ATP5DP30049 168 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 MAGEA3P43357 314 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 PPP3CCP48454 512 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 TUBP50607 506 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 FPGSQ05932 587 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 BBS9Q3SYG4 887 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 DNAJC21Q5F1R6 531 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 PIK3R6Q5UE93 754 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 AFMIDQ63HM1 303 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 NUGGCQ68CJ6 796 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 CAND1Q86VP6 1230 aaKnown RBP14.81□□□□□ -0.04
CDK3-201ENST00000425876 TP53INP2Q8IXH6 220 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 ZNF567Q8N184 647 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 FIBCD1Q8N539 461 aa14.81□□□□□ -0.04
CDK3-201ENST00000425876 RTL3Q8N8U3 475 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms