RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ARID5BQ14865 1188 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 MS4A13Q5J8X5 152 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 MIIPQ5JXC2 388 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 DPY19L2P1Q6NXN4 242 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 SARM1Q6SZW1 724 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 ZNF557Q8N988 423 aaPredicted RBP16.77■□□□□ 0.28
DDR1-234ENST00000424544 PRICKLE1Q96MT3 831 aaPredicted RBP16.77■□□□□ 0.28
DDR1-234ENST00000424544 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
DDR1-234ENST00000424544 SERPINB11Q96P15 392 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 PCED1AQ9H1Q7 454 aa16.77■□□□□ 0.28
DDR1-234ENST00000424544 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 A0A1B0GTH6 734 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 A0A1B0GTW7 788 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 GTPBP10A4D1E9 387 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 C10orf142B7Z368 130 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 PES1O00541 588 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 CBFA2T2O43439 604 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 OPHN1O60890 802 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 ATP5BP06576 529 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 GNSP15586 552 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 RPS14P62263 151 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 RPS24P62847 133 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 BNC1Q01954 994 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 ZBTB16Q05516 673 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 NR1I3Q14994 352 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 ST3GAL2Q16842 350 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 PLEKHG6Q3KR16 790 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 GJB7Q6PEY0 223 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 DBX2Q6ZNG2 339 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 RGL4Q8IZJ4 473 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 KDM1BQ8NB78 822 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 OR2I1PQ8NGU4 316 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 SHC3Q92529 594 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 GOLGA1Q92805 767 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 MRGPRX3Q96LB0 322 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 CRACR2AQ9BSW2 395 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 GTPBP2Q9BX10 602 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 ZDHHC5Q9C0B5 715 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 SLC32A1Q9H598 525 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 FBRSQ9HAH7 460 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
DDR1-234ENST00000424544 IFNKQ9P0W0 207 aa16.76■□□□□ 0.27
DDR1-234ENST00000424544 FAM221BA6H8Z2 402 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 E5RJQ4 531 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 MED7O43513 233 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 KRT5P13647 590 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 PON1P27169 355 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 ATXN3P54252 364 aaPredicted RBP16.75■□□□□ 0.27
DDR1-234ENST00000424544 YWHAZP63104 245 aaKnown RBP16.75■□□□□ 0.27
DDR1-234ENST00000424544 FAM193AP78312 1265 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 APBA1Q02410 837 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 TAC4Q86UU9 113 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 ZNF366Q8N895 744 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 HJURPQ8NCD3 748 aaPredicted RBP16.75■□□□□ 0.27
DDR1-234ENST00000424544 ADAM32Q8TC27 787 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
DDR1-234ENST00000424544 TRIM5Q9C035 493 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 POPDC2Q9HBU9 364 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 SUN2Q9UH99 717 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 XPO7Q9UIA9 1087 aaKnown RBP16.75■□□□□ 0.27
DDR1-234ENST00000424544 PCDHGC3Q9UN70 934 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 ZZEF1O43149 2961 aa16.75■□□□□ 0.27
DDR1-234ENST00000424544 AKAP13Q12802 2813 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 LGALS16A8MUM7 142 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 KCNU1A8MYU2 1149 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 TRUB2O95900 331 aaKnown RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 TPM3P06753 285 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 PROS1P07225 676 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 ACADMP11310 421 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 POLR2EP19388 210 aaKnown RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 GNA15P30679 374 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 ACSL1P33121 698 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 ARID5AQ03989 594 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 UBXN1Q04323 297 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 GRIK2Q13002 908 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 PDCLQ13371 301 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 TAF5Q15542 800 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 DCAF6Q58WW2 860 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 ZC3H12AQ5D1E8 599 aaKnown RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 KDF1Q8NAX2 398 aaPredicted RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 ORAI3Q9BRQ5 295 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 TRIM62Q9BVG3 475 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 RSPH9Q9H1X1 276 aaPredicted RBP16.74■□□□□ 0.27
DDR1-234ENST00000424544 LHX5Q9H2C1 402 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 SIX2Q9NPC8 291 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 OSGEPQ9NPF4 335 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 TJP2Q9UDY2 1190 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 SLCO1B1Q9Y6L6 691 aa16.74■□□□□ 0.27
DDR1-234ENST00000424544 LAMA5O15230 3695 aa16.73■□□□□ 0.27
DDR1-234ENST00000424544 CHD6Q8TD26 2715 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms