RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 BCAR1P56945 870 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 CACNB2Q08289 660 aaPredicted RBP14.73□□□□□ -0.05
MSH5-206ENST00000423982 PDE1CQ14123 709 aaPredicted RBP14.73□□□□□ -0.05
MSH5-206ENST00000423982 PCLAFQ15004 111 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 PABPC1LQ4VXU2 614 aaKnown RBP14.73□□□□□ -0.05
MSH5-206ENST00000423982 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 PDPK2PQ6A1A2 396 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 GSDMBQ8TAX9 411 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 PPP1R36Q96LQ0 422 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 C16orf70Q9BSU1 422 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 KLC2Q9H0B6 622 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 NGRNQ9NPE2 291 aaKnown RBP14.73□□□□□ -0.05
MSH5-206ENST00000423982 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 GINS2Q9Y248 185 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 SF3B1O75533 1304 aaKnown RBP eCLIP14.73□□□□□ -0.051e-8■■■■■ 28.9
MSH5-206ENST00000423982 BPTFQ12830 3046 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 C15orf38-AP3S2A0A0A6YYH1 394 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 WDR27A2RRH5 827 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 SMIM18P0DKX4 95 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 RGS7P49802 495 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 DGKDQ16760 1214 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 ARPINQ7Z6K5 226 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 ADGRG6Q86SQ4 1221 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 PGBD4Q96DM1 585 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 OLFM3Q96PB7 478 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 UBAP1Q9NZ09 502 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 E9PBE3 544 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TRDMT1O14717 391 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 B4GALT5O43286 388 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ZBTB14O43829 449 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 KLHL41O60662 606 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 PRKCGP05129 697 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TFE3P19532 575 aaPredicted RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 GBE1Q04446 702 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TBL3Q12788 808 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 GRM2Q14416 872 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TBCCQ15814 346 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 BSPRYQ5W0U4 402 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 OR6B2Q6IFH4 312 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CASC4Q6P4E1 433 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CES3Q6UWW8 571 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TMC7Q7Z402 723 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 NLRP4Q96MN2 994 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 EBNA1BP2Q99848 306 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 AP5M1Q9H0R1 490 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 LHX5Q9H2C1 402 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 IFT122Q9HBG6 1241 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 SETD4Q9NVD3 440 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 MFHAS1Q9Y4C4 1052 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 AK5Q9Y6K8 562 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 BIRC5O15392 142 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 HNRNPRO43390 633 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 PRPSAP2O60256 369 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ATP6V1B1P15313 513 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ZNF143P52747 638 aaPredicted RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 CHN2P52757 468 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 USP46P62068 366 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TMEM62Q0P6H9 643 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 SLC10A2Q12908 348 aaPredicted RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 FAM183BPQ6ZVS7 135 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 PLPPR4Q7Z2D5 763 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TNS4Q8IZW8 715 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 MCRS1Q96EZ8 462 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ATXN7L3BQ96GX2 97 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 DDX18Q9NVP1 670 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 ASNSD1Q9NWL6 643 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 MKS1Q9NXB0 559 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 TMEM216Q9P0N5 145 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 SRRDQ9UH36 339 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 SIX4Q9UIU6 781 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CPSF3Q9UKF6 684 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 SLC4A7Q9Y6M7 1214 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 SIP14410 1827 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ZNF195O14628 629 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CREB3O43889 395 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CXCL8P10145 99 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CYP3A5P20815 502 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 GPD1P21695 349 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 GPD2P43304 727 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ATXN1P54253 815 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 PTPN11Q06124 597 aaPredicted RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 ANKRD20A4Q4UJ75 823 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 RBM44Q6ZP01 1051 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 METTL25Q8N6Q8 603 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 ACTRT2Q8TDY3 377 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 HIC2Q96JB3 615 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 BEGAINQ9BUH8 593 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 NIFKQ9BYG3 293 aaKnown RBP14.72□□□□□ -0.05
MSH5-206ENST00000423982 CEP41Q9BYV8 373 aa14.72□□□□□ -0.05
MSH5-206ENST00000423982 CCDC160A6NGH7 325 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 C2CD4BA6NLJ0 364 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 APOL1O14791 398 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 VILLO15195 856 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 PLIN3O60664 434 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 AKR1A1P14550 325 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 PMLP29590 882 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 GABRB2P47870 512 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 DEUP1Q05D60 604 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 ITGA9Q13797 1035 aa14.71□□□□□ -0.05
MSH5-206ENST00000423982 TFDP2Q14188 446 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms