RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RNF11Q9Y3C5 154 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 XPO1O14980 1071 aaKnown RBP17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 THRAP10827 490 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 ENO3P13929 434 aaPredicted RBP17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 COL11A2P13942 1736 aaPredicted RBP17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 TGM2P21980 687 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 GLDCP23378 1020 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 GPD2P43304 727 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 AP3M2P53677 418 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 SLC9A4Q6AI14 798 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 FAM183BPQ6ZVS7 135 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 PTAR1Q7Z6K3 402 aaPredicted RBP17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 ZNF554Q86TJ5 538 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 NETO2Q8NC67 525 aa17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 RSL24D1Q9UHA3 163 aaKnown RBP17.09■□□□□ 0.33
NPC1L1-203ENST00000423141 C7orf72A4D263 438 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 ALDH1A2O94788 518 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 ERVK-10P10266 1014 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 OR6B2Q6IFH4 312 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 TSPAN14Q8NG11 270 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 ZSCAN18Q8TBC5 510 aaPredicted RBP17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 MARK4Q96L34 752 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 SEMA6AQ9H2E6 1030 aa17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 PRPF19Q9UMS4 504 aaKnown RBP17.08■□□□□ 0.33
NPC1L1-203ENST00000423141 PRSS51A0A1B0GVH4 220 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 BOLA2-SMG1P6H3BVE0 249 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 CHRNGP07510 517 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 TPSB2P20231 275 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 MGAT1P26572 445 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 ABCG1P45844 678 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 CREB5Q02930 508 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 TPSAB1Q15661 275 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 SUPT20HL1Q3ZLR7 823 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 CCDC14Q49A88 953 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 TMEM198Q66K66 360 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 STEAP4Q687X5 459 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 TMEM102Q8N9M5 508 aaPredicted RBP17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 TDRD5Q8NAT2 981 aaKnown RBP17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 FNDC8Q8TC99 324 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 NLRP7Q8WX94 980 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 SERPINI1Q99574 410 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 CCT7Q99832 543 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 SNRNP25Q9BV90 132 aaKnown RBP17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 RNF146Q9NTX7 359 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 MAP3K20Q9NYL2 800 aaKnown RBP17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 CDY2AQ9Y6F7 541 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
NPC1L1-203ENST00000423141 WDR46O15213 610 aaKnown RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 OATP04181 439 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 MPSTP25325 297 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 ALDH16A1Q8IZ83 802 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 CATSPER1Q8NEC5 780 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF668Q96K58 619 aaPredicted RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 FERMT1Q9BQL6 677 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 MFHAS1Q9Y4C4 1052 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 SIP14410 1827 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 MSCO60682 206 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 GCATO75600 419 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 LTFP02788 710 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 ASNSP08243 561 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 SETSIPP0DME0 302 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF26P17031 533 aaPredicted RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 PSMC3P17980 439 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 NUMBP49757 651 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 GTF2A2P52657 109 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 IRF9Q00978 393 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 ZFP1Q6P2D0 407 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 CHERPQ8IWX8 916 aaKnown RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 SNX15Q9NRS6 342 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 CPSF3Q9UKF6 684 aaKnown RBP17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 HES2Q9Y543 173 aa17.07■□□□□ 0.32
NPC1L1-203ENST00000423141 RGSL1A5PLK6 1076 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 SUPT3HO75486 399 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 TFE3P19532 575 aaPredicted RBP17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 FGFR3P22607 806 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 RPL10P27635 214 aaKnown RBP17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 MLH1P40692 756 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 RGS7P49802 495 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 DLG2Q15700 870 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 LSM12Q3MHD2 195 aaKnown RBP17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 KCNT2Q6UVM3 1135 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 LPCAT2Q7L5N7 544 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 TRIML2Q8N7C3 387 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 ARNTL2Q8WYA1 636 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CDKL2Q92772 493 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CEP41Q9BYV8 373 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 EPS15L1Q9UBC2 864 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 SIX4Q9UIU6 781 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms