RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MAPK8P45983 427 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 NOVA1P51513 510 aaKnown RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 RPS14P62263 151 aaKnown RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 PTK2Q05397 1052 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 SEMA3BQ13214 749 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 TPD52L1Q16890 204 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 FNDC3BQ53EP0 1204 aaKnown RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 SH3PXD2AQ5TCZ1 1133 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 RAP1GAP2Q684P5 730 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 PIP4P1Q86T03 277 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 LGI2Q8N0V4 545 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 CADM4Q8NFZ8 388 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 CEP76Q8TAP6 659 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 FOXJ1Q92949 421 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 DDX50Q9BQ39 737 aaKnown RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 TRIM62Q9BVG3 475 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 PLA2G4CQ9UP65 541 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 NFE2L3Q9Y4A8 694 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 DOCK9Q9BZ29 2069 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 SPEGQ15772 3267 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ITIH6Q6UXX5 1313 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 UPK3BL1B0FP48 263 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 C10orf142B7Z368 130 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 UPK3BL2E5RIL1 263 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 I6L893 689 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ARHGAP33O14559 1287 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 HSF2BPO75031 334 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 NDUFS2O75306 463 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 GRAP2O75791 330 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 APOEP02649 317 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ATP5BP06576 529 aaKnown RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 POLR2EP19388 210 aaKnown RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 TFE3P19532 575 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ACSL1P33121 698 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 CTSOP43234 321 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 IRAK1P51617 712 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 SHC2P98077 582 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 BNC1Q01954 994 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ARID5AQ03989 594 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 GFPT1Q06210 699 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 KCNJ12Q14500 433 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 DRAP1Q14919 205 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 UAP1L1Q3KQV9 507 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 TCP11X2Q5H9J9 407 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 PITRM1Q5JRX3 1037 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 EFHC1Q5JVL4 640 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ARTNQ5T4W7 220 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 KLHDC7AQ5VTJ3 777 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 DCAF12L1Q5VU92 463 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 C11orf57Q6ZUT1 292 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 SLC26A9Q7LBE3 791 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 FAM114A1Q8IWE2 563 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 APCDD1Q8J025 514 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 CARNMT1Q8N4J0 409 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ZNF557Q8N988 423 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 DEFB124Q8NES8 71 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ZNF397Q8NF99 534 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 RSPH9Q9H1X1 276 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 ANLNQ9NQW6 1124 aa11.42□□□□□ -0.58
SSBP3-206ENST00000420121 DNAAF2Q9NVR5 837 aaKnown RBP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.42□□□□□ -0.58
SSBP3-206ENST00000420121 CABIN1Q9Y6J0 2220 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ASPMQ8IZT6 3477 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CHD5Q8TDI0 1954 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 SIN3BO75182 1162 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 DAB1O75553 588 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ASLP04424 464 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CEACAM1P13688 526 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CD59P13987 128 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CYP11B1P15538 503 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 OXTRP30559 389 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 GABRB2P47870 512 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CDK17Q00537 523 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 SLC6A3Q01959 620 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ZNF252P-AS1Q0IIN9 211 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 HNRNPA1L2Q32P51 320 aaKnown RBP11.41□□□□□ -0.58
SSBP3-206ENST00000420121 PLEKHG6Q3KR16 790 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CT47A1Q5JQC4 288 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-206ENST00000420121 WDR45BQ5MNZ6 344 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CDKAL1Q5VV42 579 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CXorf57Q6NSI4 855 aaKnown RBP11.41□□□□□ -0.58
SSBP3-206ENST00000420121 FBXL22Q6P050 247 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 RABEPKQ7Z6M1 372 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 FAM124AQ86V42 546 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 CIR1Q86X95 450 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-206ENST00000420121 RGL4Q8IZJ4 473 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 MINDY1Q8N5J2 469 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ATP6V0D2Q8N8Y2 350 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 KDM1BQ8NB78 822 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 OR52K2Q8NGK3 314 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ENOX1Q8TC92 643 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms