RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 INHBAP08476 426 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MYL4P12829 197 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 COX4I1P13073 169 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 DDX5P17844 614 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ENPP1P22413 925 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CTSWP56202 376 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PHC1P78364 1004 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 EIF2B5Q13144 721 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TRPC3Q13507 836 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 UBE2SQ16763 222 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 INAVAQ3KP66 663 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CCDC14Q49A88 953 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 FSCBQ5H9T9 825 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 C16orf89Q6UX73 402 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 HAUS6Q7Z4H7 955 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 BTLAQ7Z6A9 289 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ZNF786Q8N393 782 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NATD1Q8N6N6 113 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TNIP2Q8NFZ5 429 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ANGPTL6Q8NI99 470 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PDCD6IPQ8WUM4 868 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ATL1Q8WXF7 558 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 RAPGEF4Q8WZA2 1011 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TRIB2Q92519 343 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 DCPSQ96C86 337 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 SENP7Q9BQF6 1050 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 WDR83Q9BRX9 315 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TSEN34Q9BSV6 310 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 B3GNT4Q9C0J1 378 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ZFAND3Q9H8U3 227 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NANOGQ9H9S0 305 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 UBE2TQ9NPD8 197 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 KCNQ5Q9NR82 932 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GINM1Q9NU53 330 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PARVAQ9NVD7 372 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ARMC1Q9NVT9 282 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 THG1LQ9NWX6 298 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 HOXC10Q9NYD6 342 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 DNMT3BQ9UBC3 853 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NOCTQ9UK39 431 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 DNPEPQ9ULA0 475 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 KIAA1257Q9ULG3 409 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ZNF142P52746 1687 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SNAP23O00161 211 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PLOD2O00469 737 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 CYB561D2O14569 222 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 HOXC11O43248 304 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TGFB1I1O43294 461 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 EDIL3O43854 480 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GCNT3O95395 438 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SGPL1O95470 568 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TRIM49P0CI25 452 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TRIM49CP0CI26 452 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 XRCC1P18887 633 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 NCF2P19878 526 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GRK2P25098 689 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 RFC4P35249 363 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 RFC1P35251 1148 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ETV3P41162 512 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 P2RX3P56373 397 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GNG2P59768 71 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 MRPS5P82675 430 aaKnown RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PTP4A2Q12974 167 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DNASE1L3Q13609 305 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ALCAMQ13740 583 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PCSK7Q16549 785 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 C15orf59Q2T9L4 293 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 BOLA3Q53S33 107 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 CEP78Q5JTW2 689 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLC10A5Q5PT55 438 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 FNBP1LQ5T0N5 605 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLX4IPQ5VYV7 408 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 C16orf46Q6P387 395 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DRICH1Q6PGQ1 229 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TTC33Q6PID6 262 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 KIF6Q6ZMV9 814 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ARCQ7LC44 396 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PCGF5Q86SE9 256 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DSG4Q86SJ6 1040 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 RHPN2Q8IUC4 686 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 IFNL2Q8IZJ0 200 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SYNE4Q8N205 404 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 LMO3Q8TAP4 145 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLC44A1Q8WWI5 657 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 HAS1Q92839 578 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SH3YL1Q96HL8 342 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DCAF5Q96JK2 942 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 CNDP2Q96KP4 475 aaKnown RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 KLHL32Q96NJ5 620 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 NACC1Q96RE7 527 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 YME1L1Q96TA2 773 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TCF12Q99081 682 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DHRS9Q9BPW9 319 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 REEP2Q9BRK0 252 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 RUSC1Q9BVN2 902 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 WDR12Q9GZL7 423 aaKnown RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TRIT1Q9H3H1 467 aaKnown RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 FAM96AQ9H5X1 160 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 HMG20AQ9NP66 347 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms