RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CST8O60676 142 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 RTN3O95197 1032 aaPredicted RBP11.92□□□□□ -0.5
RFFL-205ENST00000415395 SOD2P04179 222 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 NCAM1P13591 858 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 ZFXP17010 805 aaPredicted RBP11.92□□□□□ -0.5
RFFL-205ENST00000415395 TFE3P19532 575 aaPredicted RBP11.92□□□□□ -0.5
RFFL-205ENST00000415395 TGM2P21980 687 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 FOXN2P32314 431 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 PPM1AP35813 382 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 WDR4P57081 412 aaKnown RBP11.92□□□□□ -0.5
RFFL-205ENST00000415395 SCAPQ12770 1279 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
RFFL-205ENST00000415395 LLGL1Q15334 1064 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 HIF1AQ16665 826 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 RAB6CQ53S08 254 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 SYPL2Q5VXT5 272 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 BSPRYQ5W0U4 402 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 PPIL6Q8IXY8 311 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 NDRG1Q92597 394 aaKnown RBP11.92□□□□□ -0.5
RFFL-205ENST00000415395 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 HERC2P3Q9BVR0 1158 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 RAB6CQ9H0N0 254 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 RNPEPL1Q9HAU8 725 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 FZD10Q9ULW2 581 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 SCML2Q9UQR0 700 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 L3MBTL1Q9Y468 752 aa11.92□□□□□ -0.5
RFFL-205ENST00000415395 FAM92AA1XBS5 289 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 C2CD2LO14523 706 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 CD48P09326 243 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PECAM1P16284 738 aaPredicted RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 CALB2P22676 271 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 L1CAMP32004 1257 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PBX3P40426 434 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 RPL10AP62906 217 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 TAF11Q15544 211 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 OASLQ15646 514 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 PSMD5Q16401 504 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 EFHC2Q5JST6 749 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 ANKRD20A2Q5SQ80 823 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SPOUT1Q5T280 376 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 RNASEH2BQ5TBB1 312 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 ANKRD20A1Q5TYW2 823 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 ANKRD20A3Q5VUR7 823 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 MON1AQ86VX9 555 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SCN4BQ8IWT1 228 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 ZBED8Q8IZ13 594 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 COLGALT1Q8NBJ5 622 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SLC35B2Q8TB61 432 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SLC7A14Q8TBB6 771 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 SPG21Q9NZD8 308 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 LNPEPQ9UIQ6 1025 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 SGK1O00141 431 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 APOL1O14791 398 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SPAG7O75391 227 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SPAG6O75602 509 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 FGBP02675 491 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 HAPLN1P10915 354 aaPredicted RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 IL4RP24394 825 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PTPN4P29074 926 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PSEN1P49768 467 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 RABGGTBP53611 331 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 YWHAGP61981 247 aaKnown RBP eCLIP11.91□□□□□ -0.5
RFFL-205ENST00000415395 DSG1Q02413 1049 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 FPGSQ05932 587 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 MGAT5Q09328 741 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PDIA2Q13087 525 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 ARL13BQ3SXY8 428 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 TPGS2Q68CL5 300 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SLC9A4Q6AI14 798 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 KIAA1841Q6NSI8 718 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PSRC1Q6PGN9 363 aaPredicted RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 BZW1Q7L1Q6 419 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 DDX53Q86TM3 631 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 SCAMP5Q8TAC9 235 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 YME1L1Q96TA2 773 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 DHX35Q9H5Z1 703 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 WDR6Q9NNW5 1121 aaKnown RBP11.91□□□□□ -0.5
RFFL-205ENST00000415395 DNPEPQ9ULA0 475 aa11.91□□□□□ -0.5
RFFL-205ENST00000415395 MCF2LO15068 1137 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 IGLV3-25P01717 112 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 ACRP10323 421 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 ARL4AP40617 200 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 GLUD2P49448 558 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 CXCR3P49682 368 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 ATXN1P54253 815 aaKnown RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 HTRA4P83105 476 aaPredicted RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 OTUD4Q01804 1114 aaKnown RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 CREMQ03060 361 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 NOMO1Q15155 1222 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms