RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 IGLV3-10A0A075B6K4 115 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 BCLAF3A2AJT9 711 aaKnown RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 ALOX15BO15296 676 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ADAM23O75077 832 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 RTN2O75298 545 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 MMEP08473 750 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 TPM1P09493 284 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 MYBL1P10243 752 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 GNSP15586 552 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 HLA-FP30511 346 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 RDXP35241 583 aaKnown RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 CLCN6P51797 869 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 SEC13P55735 322 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ZBED6P86452 979 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ECT2LQ008S8 904 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 FMO1Q01740 532 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 KDSRQ06136 332 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 CDH18Q13634 790 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 AUHQ13825 339 aaKnown RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 ZNF234Q14588 700 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 GEN1Q17RS7 908 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 CLEC16AQ2KHT3 1053 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 TSR1Q2NL82 804 aaKnown RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 WDR45BQ5MNZ6 344 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 PLA2G2CQ5R387 149 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 C6orf118Q5T5N4 469 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 FAM102AQ5T9C2 384 aaPredicted RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 TMCO4Q5TGY1 634 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 SFMBT2Q5VUG0 894 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 PEAR1Q5VY43 1037 aaPredicted RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 MBLAC2Q68D91 279 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 HEATR6Q6AI08 1181 aaKnown RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 ANO7Q6IWH7 933 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 PKN3Q6P5Z2 889 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 TAC4Q86UU9 113 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ADIPOR2Q86V24 386 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ZSCAN30Q86W11 494 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 TMPRSS6Q8IU80 811 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 SYT12Q8IV01 421 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 LGI2Q8N0V4 545 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 FAM160A2Q8N612 972 aaPredicted RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 MDGA1Q8NFP4 955 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 CPA5Q8WXQ8 436 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 NTAN1Q96AB6 310 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 SIPA1Q96FS4 1042 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ZNF419Q96HQ0 510 aaPredicted RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 LMLNQ96KR4 655 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 MRGPRX1Q96LB2 322 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 CCDC114Q96M63 670 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 C2orf49Q9BVC5 232 aaPredicted RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 SELENOOQ9BVL4 669 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ZDHHC5Q9C0B5 715 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 CIPCQ9C0C6 399 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 CD248Q9HCU0 757 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 OSGEPQ9NPF4 335 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 ACP6Q9NPH0 428 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 SEMA4GQ9NTN9 838 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 PARVAQ9NVD7 372 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 PLK2Q9NYY3 685 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 LUC7L2Q9Y383 392 aaKnown RBP6.6□□□□□ -1.35
USP54-202ENST00000413442 CKAP5Q14008 2032 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 DOCK4Q8N1I0 1966 aa6.6□□□□□ -1.35
USP54-202ENST00000413442 WDFY4Q6ZS81 3184 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 NUP205Q92621 2012 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 COL4A3Q01955 1670 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 EDDM13A0A1B0GTR0 161 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 TCRBV21S2A2A0A5A6 115 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 ILVBLA1L0T0 632 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 SYCE3A1L190 88 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 ZSCAN5CA6NGD5 496 aaPredicted RBP6.59□□□□□ -1.35
USP54-202ENST00000413442 C2CD4BA6NLJ0 364 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 PIK3R2O00459 728 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 KHNYNO15037 678 aaKnown RBP6.59□□□□□ -1.35
USP54-202ENST00000413442 MSI1O43347 362 aaKnown RBP6.59□□□□□ -1.35
USP54-202ENST00000413442 DFNA5O60443 496 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 TSPAN3O60637 253 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 NDUFS2O75306 463 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 PAGE1O75459 146 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 RNF8O76064 485 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 DNTTP04053 509 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 EPHX1P07099 455 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 SYPP08247 313 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 PDGFRAP16234 1089 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 CHRNB2P17787 502 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 GABRG2P18507 467 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 TGM1P22735 817 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 CD6P30203 668 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 SLC6A4P31645 630 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 HNRNPH3P31942 346 aaKnown RBP6.59□□□□□ -1.35
USP54-202ENST00000413442 ADRA1BP35368 520 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 ID4P47928 161 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 SULT1E1P49888 294 aa6.59□□□□□ -1.35
USP54-202ENST00000413442 ZNF143P52747 638 aaPredicted RBP6.59□□□□□ -1.35
USP54-202ENST00000413442 YBEYP58557 167 aaPredicted RBP6.59□□□□□ -1.35
USP54-202ENST00000413442 RNASE9P60153 205 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms