RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRIM61Q5EBN2 209 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 CELF3Q5SZQ8 465 aaKnown RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 RSBN1Q5VWQ0 802 aaPredicted RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 C22orf42Q6IC83 251 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZCCHC8Q6NZY4 707 aaKnown RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 B3GNT9Q6UX72 402 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 NET1Q7Z628 596 aaPredicted RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRR18Q8N4B5 295 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 PNPLA1Q8N8W4 532 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 TERB1Q8NA31 727 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 GMCL1P1Q8NEA9 526 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMIEQ8NEW7 156 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLC35B2Q8TB61 432 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 LMX1AQ8TE12 382 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 GIMAP5Q96F15 307 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 C18orf12Q96KH6 178 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 FIZ1Q96SL8 496 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 LMF2Q9BU23 707 aaKnown RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 FSD1LQ9BXM9 530 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 ACBD3Q9H3P7 528 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 GAREM1Q9H706 876 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUSP22Q9NRW4 184 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 IARS2Q9NSE4 1012 aaKnown RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 ADAM22Q9P0K1 906 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF214Q9UL59 606 aaPredicted RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 RAB26Q9ULW5 256 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 FOXA2Q9Y261 457 aaPredicted RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 ATG4BQ9Y4P1 393 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 RFNGQ9Y644 331 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 TLN1Q9Y490 2541 aaKnown RBP-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 NACAE9PAV3 2078 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 NBEAQ8NFP9 2946 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 CR1P17927 2039 aa-1.33□□□□□ -2.62
RNU4-88P-201ENST00000411220 C2orf16Q68DN1 1984 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 FAM186AA6NE01 2351 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 CHD7Q9P2D1 2997 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ASTN2O75129 1339 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 A0A1B0GW55 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 KDM4EB2RXH2 506 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 GOLGA6L22H0YM25 854 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 HAT1O14929 419 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 TLR3O15455 904 aaKnown RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMPRSS11DO60235 418 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF821O75541 412 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRSS23O95084 383 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 APBB3O95704 486 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 PLAUP00749 431 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 SNRPA1P09661 255 aaKnown RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 NPSP0C0P6 89 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4L2P0CJ85 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4L3P0CJ86 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4L5P0CJ88 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4L6P0CJ89 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4L7P0CJ90 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ENGP17813 658 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 KLK2P20151 261 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 KRT85P78386 507 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DEFA5Q01523 94 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 TAGLNQ01995 201 aaKnown RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF844Q08AG5 666 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 EIF4EBP1Q13541 118 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 HLFQ16534 295 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 PREPLQ4J6C6 727 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 CDCA8Q53HL2 280 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 FIGNQ5HY92 759 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF691Q5VV52 312 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 IRGCQ6NXR0 463 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 CC2D1AQ6P1N0 951 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4L9Q6RFH8 374 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ADAMTSL5Q6ZMM2 481 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 EP400NLQ6ZTU2 488 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF572Q7Z3I7 529 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DRC7Q8IY82 874 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 Q8N377 158 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLC25A45Q8N413 288 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 RNF152Q8N8N0 203 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 RELL2Q8NC24 303 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 RBBP8NLQ8NC74 664 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLC44A5Q8NCS7 719 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMED6Q8WW62 240 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 SNX19Q92543 992 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 MUS81Q96NY9 551 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 PITX2Q99697 317 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 FOXB1Q99853 325 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF251Q9BRH9 671 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 RAB11FIP5Q9BXF6 653 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 CAPS2Q9BXY5 557 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 CHST8Q9H2A9 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 EVA1AQ9H8M9 152 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 EBF2Q9HAK2 575 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 PLEKHA3Q9HB20 300 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZFP57Q9NU63 452 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 PDP2Q9P2J9 529 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 B3GAT1Q9P2W7 334 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 CTSZQ9UBR2 303 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 RNF14Q9UBS8 474 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUX4Q9UBX2 424 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLCO3A1Q9UIG8 710 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZDHHC2Q9UIJ5 367 aa-1.34□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZDBF2Q9HCK1 2354 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms