RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 F5H423 210 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 DFFAO00273 331 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 TP73O15350 636 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ACTN2P35609 894 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 HARS2P49590 506 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 BASP1P80723 227 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 RING1Q06587 406 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 DHX9Q08211 1270 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 XRCC4Q13426 336 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PABPC1LQ4VXU2 614 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 STXBP5Q5T5C0 1151 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 MANEALQ5VSG8 457 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 NADSYN1Q6IA69 706 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 FBXL22Q6P050 247 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 LRRC31Q6UY01 552 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ADGRD2Q7Z7M1 963 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CIR1Q86X95 450 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 TMC8Q8IU68 726 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 MAB21L3Q8N8X9 362 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 EIF1ADQ8N9N8 165 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 TSEN2Q8NCE0 465 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 IGSF8Q969P0 613 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 WBP2Q969T9 261 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 C1orf74Q96LT6 269 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 RPRD1AQ96P16 312 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ADAM7Q9H2U9 754 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PRDM12Q9H4Q4 367 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CATSPERBQ9H7T0 1116 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 PRDM16Q9HAZ2 1276 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 ASAH2Q9NR71 780 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 NDFIP2Q9NV92 336 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
CHMP3-204ENST00000409727 MSRAQ9UJ68 235 aa12.82□□□□□ -0.36
CHMP3-204ENST00000409727 CHD7Q9P2D1 2997 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 GOLGA8MH3BSY2 632 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 TRDMT1O14717 391 aaKnown RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 STC2O76061 302 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 CNTN5O94779 1100 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 HDCP19113 662 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 CORO1AP31146 461 aaKnown RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 SERPINB6P35237 376 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 FAM193AP78312 1265 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 COG7P83436 770 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 PDK1Q15118 436 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 ALFQ53S48 1182 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 ARTNQ5T4W7 220 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 FAXCQ5TGI0 409 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 RFWD3Q6PCD5 774 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 KLHDC10Q6PID8 442 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 ZNF276Q8N554 614 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 HTR3CQ8WXA8 447 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 MRPS31Q92665 395 aaKnown RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 MYEOVQ96EZ4 313 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 SAMD11Q96NU1 681 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 GDF15Q99988 308 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 LRRC3Q9BY71 257 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 TPX2Q9ULW0 747 aaKnown RBP12.81□□□□□ -0.36
CHMP3-204ENST00000409727 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
CHMP3-204ENST00000409727 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 KCNK1O00180 336 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 DNALI1O14645 258 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 FGF10O15520 208 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 KLKB1P03952 638 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 TACR2P21452 398 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 SLC6A4P31645 630 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 CHKAP35790 457 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 NUMBP49757 651 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 LGI2Q8N0V4 545 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 CFAP52Q8N1V2 620 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 BBOF1Q8ND07 529 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 P2RY11Q96G91 374 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 GCNAQ96QF7 691 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 KLF16Q9BXK1 252 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 ZYG11BQ9C0D3 744 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 SLC28A3Q9HAS3 691 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 HACD1B0YJ81 288 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 F5H5T6 163 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 RFXAPO00287 272 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 ACSL4O60488 711 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 CKMP06732 381 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 HOXC13P31276 330 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 CCR2P41597 374 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 SLC11A2P49281 568 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 MTM1Q13496 603 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 PRKD1Q15139 912 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 HIBCHQ6NVY1 386 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms