RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 FNDC3BQ53EP0 1204 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 ZC3H12AQ5D1E8 599 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 NADSYN1Q6IA69 706 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 DPY19L2P1Q6NXN4 242 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 SASS6Q6UVJ0 657 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 KIAA1324Q6UXG2 1013 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 SLC26A9Q7LBE3 791 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 TAC4Q86UU9 113 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 SLC47A2Q86VL8 602 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 ZNF677Q86XU0 584 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 DNASE2BQ8WZ79 361 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 NAA15Q9BXJ9 866 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 SMOC1Q9H4F8 434 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 SAMSN1Q9NSI8 373 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 TMEM74BQ9NUR3 256 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 LAMA1P25391 3075 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 TARSL2A2RTX5 802 aaKnown RBP15.04■□□□□ -0
NIF3L1-205ENST00000409588 UPK3BL1B0FP48 263 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 UPK3BL2E5RIL1 263 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 F5H5T6 163 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 H0Y626 953 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 CDX4O14627 284 aaPredicted RBP15.04■□□□□ -0
NIF3L1-205ENST00000409588 LUC7L3O95232 432 aaKnown RBP15.04■□□□□ -0
NIF3L1-205ENST00000409588 MBD3O95983 291 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 CEACAM1P13688 526 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 ITPKAP23677 461 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 NNMTP40261 264 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 MATKP42679 507 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 GABRB2P47870 512 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 COPAP53621 1224 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 ATXN3P54252 364 aaPredicted RBP15.04■□□□□ -0
NIF3L1-205ENST00000409588 RAPGEF1Q13905 1077 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 PTPRNQ16849 979 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 RABGAP1LQ5R372 815 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 FKBP15Q5T1M5 1219 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 OR6B2Q6IFH4 312 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 TCEAL6Q6IPX3 200 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 ARCQ7LC44 396 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 DEFB106AQ8N104 65 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 TCEAL3Q969E4 200 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 RNF34Q969K3 372 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 C18orf8Q96DM3 657 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 TOE1Q96GM8 510 aaKnown RBP15.04■□□□□ -0
NIF3L1-205ENST00000409588 LMLNQ96KR4 655 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 ZDHHC5Q9C0B5 715 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 ANO10Q9NW15 660 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 STIM2Q9P246 746 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 STAP1Q9ULZ2 295 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 NUP205Q92621 2012 aa15.04■□□□□ -0
NIF3L1-205ENST00000409588 LRRC10BA6NIK2 292 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 METTL12A8MUP2 240 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 RNASEH1O60930 286 aaKnown RBP15.03■□□□□ -0
NIF3L1-205ENST00000409588 KCNK5O95279 499 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 TACR2P21452 398 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 PRKCHP24723 683 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 CD70P32970 193 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 PLK1P53350 603 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 RPS24P62847 133 aaKnown RBP15.03■□□□□ -0
NIF3L1-205ENST00000409588 APBA1Q02410 837 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 SLC14A1Q13336 389 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 CDKAL1Q5VV42 579 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 OLFML1Q6UWY5 402 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 SND1Q7KZF4 910 aaKnown RBP eCLIP15.03■□□□□ -0
NIF3L1-205ENST00000409588 ARMCX6Q7L4S7 300 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 ERICH1Q86X53 443 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 RGL4Q8IZJ4 473 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 LGI2Q8N0V4 545 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 CARNMT1Q8N4J0 409 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 ADAM32Q8TC27 787 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 SORCS1Q8WY21 1168 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 NT5C3BQ969T7 300 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 PGAP3Q96FM1 320 aaPredicted RBP15.03■□□□□ -0
NIF3L1-205ENST00000409588 HSPA12BQ96MM6 686 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 NUCKS1Q9H1E3 243 aaKnown RBP15.03■□□□□ -0
NIF3L1-205ENST00000409588 FAM204AQ9H8W3 233 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 CAPN10Q9HC96 672 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 PRSS16Q9NQE7 514 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 DDIT4Q9NX09 232 aa15.03■□□□□ -0
NIF3L1-205ENST00000409588 PATE3B3GLJ2 98 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 ARHGAP33O14559 1287 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 MOCS2O96007 188 aaPredicted RBP15.02■□□□□ -0
NIF3L1-205ENST00000409588 DNTTP04053 509 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 CFIP05156 583 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 ENGP17813 658 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 SGSHP51688 502 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 ECT2LQ008S8 904 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 HNRNPDQ14103 355 aaKnown RBP15.02■□□□□ -0
NIF3L1-205ENST00000409588 TAF5Q15542 800 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 HNRNPA1L2Q32P51 320 aaKnown RBP15.02■□□□□ -0
NIF3L1-205ENST00000409588 TTC31Q49AM3 519 aaPredicted RBP15.02■□□□□ -0
NIF3L1-205ENST00000409588 BRMS1LQ5PSV4 323 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 FAM183BPQ6ZVS7 135 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 USP30Q70CQ3 517 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 CHSY1Q86X52 802 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 PASD1Q8IV76 773 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 SLC41A1Q8IVJ1 513 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 CYB5D2Q8WUJ1 264 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 C1orf74Q96LT6 269 aa15.02■□□□□ -0
NIF3L1-205ENST00000409588 PRICKLE1Q96MT3 831 aaPredicted RBP15.02■□□□□ -0
NIF3L1-205ENST00000409588 PRMT1Q99873 361 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms