RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 IRAK3Q9Y616 596 aa13.33□□□□□ -0.28
SMARCB1-203ENST00000407082 GPR179Q6PRD1 2367 aa13.33□□□□□ -0.28
SMARCB1-203ENST00000407082 SCN1AP35498 2009 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 TMEM120BA0PK00 339 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 A8MXQ7 604 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 C2CD2LO14523 706 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 APOL1O14791 398 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 MDM4O15151 490 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 HUS1O60921 280 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SUN1O94901 812 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 EFEMP2O95967 443 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SOD2P04179 222 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 GSTA2P09210 222 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 CNPP09543 421 aaKnown RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 RBP3P10745 1247 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 GNL1P36915 607 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PTPN9P43378 593 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 NR2C2P49116 596 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 CLCN4P51793 760 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SLC20A2Q08357 652 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 XRCC4Q13426 336 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 NOMO1Q15155 1222 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 USP41Q3LFD5 358 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 TTC31Q49AM3 519 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 LACTB2Q53H82 288 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 EFHC1Q5JVL4 640 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 FAM183BPQ6ZVS7 135 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PSTKQ8IV42 348 aaKnown RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 CDKL3Q8IVW4 592 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 ANKRD52Q8NB46 1076 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 MDM1Q8TC05 714 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 CKAP2Q8WWK9 683 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PRCCQ92733 491 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SUSD3Q96L08 255 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SENP8Q96LD8 212 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 C9orf72Q96LT7 481 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 RNF157Q96PX1 679 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 SMC6Q96SB8 1091 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PIDD1Q9HB75 910 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 ARHGEF3Q9NR81 526 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 PSMC3IPQ9P2W1 217 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 CACNA1IQ9P0X4 2223 aa13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
SMARCB1-203ENST00000407082 FAM47DPA6NHR8 397 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 RASA4BC9J798 803 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 E5RJQ4 531 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 E7ESA3 106 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 H7C0C1 242 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 M0QZQ0 153 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 CYB561D2O14569 222 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 CHADO15335 359 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 RASA4O43374 803 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 GSTA1P08263 222 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 TCF4P15884 667 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 IL1R2P27930 398 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 ATP5OP48047 213 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 GEMIN4P57678 1058 aaKnown RBP13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 DYNLT1P63172 113 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 DPYSL3Q14195 570 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 SMTNL2Q2TAL5 461 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 PPP1R26Q5T8A7 1209 aaPredicted RBP13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 ZBED8Q8IZ13 594 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 TOP6BLQ8N6T0 577 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 ARFGAP1Q8N6T3 406 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 EMC1Q8N766 993 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 SLC35F5Q8WV83 523 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 LRRC39Q96DD0 335 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 B3GALT6Q96L58 329 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 MYADMQ96S97 322 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 FAM118BQ9BPY3 351 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 MAN1C1Q9NR34 630 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 MRPL17Q9NRX2 175 aaKnown RBP13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 IKBKGQ9Y6K9 419 aa13.31□□□□□ -0.28
SMARCB1-203ENST00000407082 DNAH14Q0VDD8 3507 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 BCLAF3A2AJT9 711 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 CCT8L1PA6NM43 557 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SYN3O14994 580 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 ODC1P11926 461 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 KRT15P19012 456 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 KCNA4P22459 653 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 FGFR3P22607 806 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 TKTP29401 623 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 RPL22P35268 128 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms