RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MCM7P33993 719 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 IDUAP35475 653 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 DDIT3P35638 169 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 BUD31P41223 144 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TSPAN7P41732 249 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 MCM2P49736 904 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CCT4P50991 539 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CASP6P55212 293 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ABHD18Q0P651 414 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 THOC5Q13769 683 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 LARS2Q15031 903 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TMEM119Q4V9L6 283 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 SH2D4BQ5SQS7 431 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CC2D1BQ5T0F9 858 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CCDC30Q5VVM6 783 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAAH2Q6GMR7 532 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ANO7Q6IWH7 933 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 MTFR2Q6P444 385 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TFAP2DQ7Z6R9 452 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CHD1LQ86WJ1 897 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ULK2Q8IYT8 1036 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TBC1D5Q92609 795 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 MASTLQ96GX5 879 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 PPP1R10Q96QC0 940 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 LBHD1Q9BQE6 289 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ABHD14AQ9BUJ0 271 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 HTATIP2Q9BUP3 242 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 USP44Q9H0E7 712 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TMX4Q9H1E5 349 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 PREBQ9HCU5 417 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ALG13Q9NP73 1137 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TMLHEQ9NVH6 421 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TFCP2L1Q9NZI6 479 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 AASSQ9UDR5 926 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 TBX20Q9UMR3 447 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CAMK2AQ9UQM7 478 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 GDAQ9Y2T3 454 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 C3orf70A6NLC5 250 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 GCOM1H8Y6P7 765 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 RRHO14718 337 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 TSPAN3O60637 253 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 CNTN5O94779 1100 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 RFPL3SP0C7P2 107 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 C6P13671 934 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 TNFRSF1AP19438 455 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 CAPN3P20807 821 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 VAMP2P63027 116 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 SEC23BQ15437 767 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 GPR68Q15743 365 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 AP5B1Q2VPB7 878 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM69AQ5T7M9 428 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 LIPMQ5VYY2 423 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 NAPEPLDQ6IQ20 393 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 ACAD10Q6JQN1 1059 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 CEP85Q6P2H3 762 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 DHRS13Q6UX07 377 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 H1FNTQ75WM6 255 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZNF804AQ7Z570 1209 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 ARHGEF25Q86VW2 580 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 SCN4BQ8IWT1 228 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 LSM14AQ8ND56 463 aaKnown RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 SRFBP1Q8NEF9 429 aaKnown RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 RUFY2Q8WXA3 655 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 IP6K1Q92551 441 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 CELF1Q92879 486 aaKnown RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 ELP4Q96EB1 424 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 APOPT1Q96IL0 206 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 CCDC17Q96LX7 622 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 TRIM31Q9BZY9 425 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC25A18Q9H1K4 315 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 MLXIPLQ9NP71 852 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 SEMA5BQ9P283 1151 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 HDAC6Q9UBN7 1215 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC25A13Q9UJS0 675 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 ING1Q9UK53 422 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 TMEM98Q9Y2Y6 226 aa4.29□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM90A7PA6NKC0 464 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 SAC3D1A6NKF1 404 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 C17orf100A8MU93 164 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM90A22PA8MWA6 464 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM90A12PA8MX19 464 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM90A23PA8MXZ1 464 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 TTC34A8MYJ7 566 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 DSCR3O14972 297 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 IGFBP2P18065 325 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 PROZP22891 400 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 HOXD12P35452 270 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 PTPN9P43378 593 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZNF84P51523 738 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 MVDP53602 400 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 RPP30P78346 268 aaKnown RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ARHGAP8P85298 464 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 TAP1Q03518 808 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 DMWDQ09019 674 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms