RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ZNF460Q14592 562 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 PHTF2Q8N3S3 785 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 CHRAC1Q9NRG0 131 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 GTSE1Q9NYZ3 720 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 LRCH1Q9Y2L9 728 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 LRRC42Q9Y546 428 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 BCLAF3A2AJT9 711 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 MAP3K13O43283 966 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 GLRA3O75311 464 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 GABBR2O75899 941 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 BEST1O76090 585 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ALDOAP04075 364 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 EDNRBP24530 442 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 PLK1P53350 603 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 BEX3Q00994 111 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF567Q8N184 647 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC35F5Q8WV83 523 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ULBP1Q9BZM6 244 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 SSU72Q9NP77 194 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 LNPEPQ9UIQ6 1025 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 CORO1CQ9ULV4 474 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 IGKV6-21A0A0C4DH24 114 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 SPTLC1O15269 473 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 ERCC2P18074 760 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 ARHGAP1Q07960 439 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 DNAL1Q4LDG9 190 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 NCBP2-AS2Q69YL0 99 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 KBTBD2Q8IY47 623 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 FGD4Q96M96 766 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 SNX15Q9NRS6 342 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 KIAA1257Q9ULG3 409 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 VANGL2Q9ULK5 521 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 STAP1Q9ULZ2 295 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 NUP205Q92621 2012 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 HMX2A2RU54 273 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 FAM72CH0Y354 149 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC26A2P50443 739 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 NAGLUP54802 743 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 PDK1Q15118 436 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 FAM72AQ5TYM5 149 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 FAM72DQ6L9T8 149 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 FAM72BQ86X60 149 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF781Q8N8C0 355 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 GPRC5AQ8NFJ5 357 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 CATSPER2Q96P56 530 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 SIN3BO75182 1162 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 SP100P23497 879 aaPredicted RBP12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 TKTP29401 623 aaKnown RBP12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 CRHR1P34998 444 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 BTKQ06187 659 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 TBL3Q12788 808 aaKnown RBP12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 EFHC1Q5JVL4 640 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 C9orf57Q5W0N0 161 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 NOTUMQ6P988 496 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 GCNAQ96QF7 691 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 NME7Q9Y5B8 376 aa12.98□□□□□ -0.33
PPP4R1-202ENST00000400555 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 PPP1R12AO14974 1030 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 PLIN3O60664 434 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 AP1G2O75843 785 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 CHRNGP07510 517 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 DHRS4L1P0CG22 281 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ATP6V1B1P15313 513 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TSPAN8P19075 237 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC12A2P55011 1212 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 CCNA1P78396 465 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 OCRLQ01968 901 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 CTBP1Q13363 440 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 MMEL1Q495T6 779 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC30A9Q6PML9 568 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ANKRD52Q8NB46 1076 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 LPPQ93052 612 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 CERS2Q96G23 380 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SERPINE1P05121 402 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TAF6P49848 677 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 DSG1Q02413 1049 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TMEM198Q66K66 360 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ZSCAN18Q8TBC5 510 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.331e-7■■■□□ 17.8
PPP4R1-202ENST00000400555 PAPOLBQ9NRJ5 636 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ADA2Q9NZK5 511 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 RUVBL2Q9Y230 463 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TRIP11Q15643 1979 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TK2O00142 265 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TGDSO95455 350 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 RAG1P15918 1043 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SPRP35270 261 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 GABRB2P47870 512 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 ART3Q13508 389 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC9A4Q6AI14 798 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms