RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 MGAT1P26572 445 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 PRDX6P30041 224 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 TSHZ1Q6ZSZ6 1077 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 BHLHE22Q8NFJ8 381 aaPredicted RBP14.34□□□□□ -0.11
APOB-202ENST00000399256 SNRNP27Q8WVK2 155 aaKnown RBP14.34□□□□□ -0.11
APOB-202ENST00000399256 GAB3Q8WWW8 586 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 CDKL2Q92772 493 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 TMEM176AQ96HP8 235 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 GMEB1Q9Y692 573 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 AMHP03971 560 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 DESP17661 470 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 PIK3R1P27986 724 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 COG7P83436 770 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 CYTH1Q15438 398 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 TMEM192Q8IY95 271 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 DSELQ8IZU8 1212 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 CIDEBQ9UHD4 219 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
APOB-202ENST00000399256 HEMK1Q9Y5R4 338 aaPredicted RBP14.34□□□□□ -0.11
APOB-202ENST00000399256 ARHGAP10A1A4S6 786 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 SPATA31C2B4DYI2 1134 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 PRKCBP05771 671 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 CCDC166P0CW27 439 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 ERVK-10P10266 1014 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 MX2P20592 715 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 MS4A2Q01362 244 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 KCNT2Q6UVM3 1135 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 BNC2Q6ZN30 1099 aaPredicted RBP14.33□□□□□ -0.11
APOB-202ENST00000399256 RBM12BQ8IXT5 1001 aaKnown RBP14.33□□□□□ -0.11
APOB-202ENST00000399256 PLD6Q8N2A8 252 aaKnown RBP14.33□□□□□ -0.11
APOB-202ENST00000399256 SERPINI1Q99574 410 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 BCO2Q9BYV7 579 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 GCOM2Q9BZD3 368 aaPredicted RBP14.33□□□□□ -0.11
APOB-202ENST00000399256 TCF7L2Q9NQB0 619 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 PLK2Q9NYY3 685 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 SIX4Q9UIU6 781 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 PCDHB12Q9Y5F1 795 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 CDY2AQ9Y6F7 541 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 CDY1Q9Y6F8 540 aa14.33□□□□□ -0.11
APOB-202ENST00000399256 BTBD19C9JJ37 291 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 GCATO75600 419 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 CXCL8P10145 99 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 ENO3P13929 434 aaPredicted RBP14.33□□□□□ -0.12
APOB-202ENST00000399256 APOFQ13790 326 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 ZNF410Q86VK4 478 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 TDRD5Q8NAT2 981 aaKnown RBP14.33□□□□□ -0.12
APOB-202ENST00000399256 TXNDC16Q9P2K2 825 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 MFHAS1Q9Y4C4 1052 aa14.33□□□□□ -0.12
APOB-202ENST00000399256 FZD9O00144 591 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 NOP56O00567 594 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 TRMUO75648 421 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 ALDH1A2O94788 518 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 NELFEP18615 380 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 CYP3A5P20815 502 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 MLH1P40692 756 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 ABCG1P45844 678 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 EMP3P54852 163 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 ZNF423Q2M1K9 1284 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 BOLA3Q53S33 107 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 ACBD5Q5T8D3 534 aaPredicted RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 STEAP4Q687X5 459 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 KYQ8NBH2 561 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 RCN3Q96D15 328 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 PLEKHG4BQ96PX9 1271 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 CEP41Q9BYV8 373 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 LIN28AQ9H9Z2 209 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 TIMMDC1Q9NPL8 285 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 RPS6KL1Q9Y6S9 549 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 CILPO75339 1184 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 ITGB3P05106 788 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 NFICP08651 508 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 TFE3P19532 575 aaPredicted RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 TCN1P20061 433 aaPredicted RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 DCTN2Q13561 401 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 SURF1Q15526 300 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 DUS1LQ6P1R4 473 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 C16orf89Q6UX73 402 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 TICAM1Q8IUC6 712 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 RNF149Q8NC42 400 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 MTMR14Q8NCE2 650 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 KBTBD7Q8WVZ9 684 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 KCNN1Q92952 543 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 SNX15Q9NRS6 342 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 PRPF19Q9UMS4 504 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 B4GALT5O43286 388 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 THRAP10827 490 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 ATXN1P54253 815 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 FSTL1Q12841 308 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 SEMA5AQ13591 1074 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 CEACAM7Q14002 265 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 HEATR6Q6AI08 1181 aaKnown RBP14.32□□□□□ -0.12
APOB-202ENST00000399256 LRRC71Q8N4P6 559 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 C1orf127Q8N9H9 656 aa14.32□□□□□ -0.12
APOB-202ENST00000399256 CATSPER1Q8NEC5 780 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms