RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 AZIN2Q96A70 460 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 EPAS1Q99814 870 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 PRMT1Q99873 361 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 SIK2Q9H0K1 926 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 ARHGEF4Q9NR80 690 aa17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 R3HDM2Q9Y2K5 976 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-205ENST00000397406 CCDC188H7C350 402 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 NARSO43776 548 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 GREM1O60565 184 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 LRIG2O94898 1065 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 IRF1P10914 325 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 CORO1AP31146 461 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 HOXC13P31276 330 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 HTR7P34969 479 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 HARS2P49590 506 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 TPI1P60174 286 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 NHLH1Q02575 133 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 TCF15Q12870 199 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 CYP1B1Q16678 543 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 ACBD5Q5T8D3 534 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 RFX8Q6ZV50 586 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 C14orf80Q86SX3 495 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 UBALD2Q8IYN6 164 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 CMTM8Q8IZV2 173 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 PLD5Q8N7P1 536 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 PHOX2BQ99453 314 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 MAK16Q9BXY0 300 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 EPS15L1Q9UBC2 864 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 ZMYM5Q9UJ78 669 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 ARHGAP26Q9UNA1 814 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 MRPS23Q9Y3D9 190 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 MYO10Q9HD67 2058 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 ACSL4O60488 711 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 AMPD1P23109 780 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 DYNLT1P63172 113 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 AUHQ13825 339 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 FAM133BQ5BKY9 247 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 C12orf50Q8NA57 414 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 NOA1Q8NC60 698 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 ING5Q8WYH8 240 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 PRDM16Q9HAZ2 1276 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 ETNK2Q9NVF9 386 aa17.47■□□□□ 0.39
TSPAN4-205ENST00000397406 DOCK8Q8NF50 2099 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 ZDBF2Q9HCK1 2354 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 IGLV3-10A0A075B6K4 115 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 GOLGA6L10A0A0M3HER8 536 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 E9PAM4 449 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 APOC4-APOC2K7ER74 178 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 APOL1O14791 398 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 DCLK1O15075 740 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 LATS1O95835 1130 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 APOC2P02655 101 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 AVPR2P30518 371 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 SLC11A2P49281 568 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 RAP1GAP2Q684P5 730 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 NCBP2-AS2Q69YL0 99 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 Q6ZNB5 142 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 DENND1CQ8IV53 801 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 MMGT1Q8N4V1 131 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 TBC1D31Q96DN5 1066 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 ZSWIM3Q96MP5 696 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 RPP25Q9BUL9 199 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 STOML2Q9UJZ1 356 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 AGO1Q9UL18 857 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 MFHAS1Q9Y4C4 1052 aa17.46■□□□□ 0.39
TSPAN4-205ENST00000397406 KMT2EQ8IZD2 1858 aa17.46■□□□□ 0.38
TSPAN4-205ENST00000397406 GOLGA6L7A0A1B0GV03 622 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 LEFTY2O00292 366 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 PHF2O75151 1096 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 ZFXP17010 805 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 ERCC2P18074 760 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 TACR2P21452 398 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 TGM2P21980 687 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 EPHB2P29323 1055 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 SLC6A4P31645 630 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 AVPR1AP37288 418 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 NPNTQ6UXI9 565 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 TMEM105Q8N8V8 129 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 C1orf54Q8WWF1 131 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 ATG4AQ8WYN0 398 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 DDX47Q9H0S4 455 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 SMG9Q9H0W8 520 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 KCNH6Q9H252 994 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 SLITRK6Q9H5Y7 841 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 LRRC19Q9H756 370 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 CFAP97Q9P2B7 532 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 SAE1Q9UBE0 346 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 PPARGC1AQ9UBK2 798 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 VANGL2Q9ULK5 521 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 CCL26Q9Y258 94 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 NUP205Q92621 2012 aa17.45■□□□□ 0.38
TSPAN4-205ENST00000397406 DRGXA6NNA5 263 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 EFCAB8A8MWE9 144 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 ANHXE9PGG2 379 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 DAPK3O43293 454 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 PRAMEF12O95522 483 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms