RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 HEMK1Q9Y5R4 338 aaPredicted RBP24.62■■□□□ 1.53
CSNK1E-203ENST00000396832 PSAT1Q9Y617 370 aa24.62■■□□□ 1.53
CSNK1E-203ENST00000396832 TPP1O14773 563 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 ABCD1P33897 745 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 ATXN3P54252 364 aaPredicted RBP24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 CDKL1Q00532 357 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 USP41Q3LFD5 358 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 FNDC8Q8TC99 324 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 TMEM176AQ96HP8 235 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 LHX5Q9H2C1 402 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 ARHGEF38Q9NXL2 777 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 GTF2A2P52657 109 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 TFDP2Q14188 446 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 ATF7IP2Q5U623 682 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 JADE1Q6IE81 842 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 ZNF513Q8N8E2 541 aaPredicted RBP24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 RIN3Q8TB24 985 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 LPIN3Q9BQK8 851 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 SNRNP25Q9BV90 132 aaKnown RBP24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 STK39Q9UEW8 545 aa24.61■■□□□ 1.53
CSNK1E-203ENST00000396832 FAM159BA6NKW6 160 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 ZNF195O14628 629 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 FARP2O94887 1054 aaPredicted RBP24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 SERPINE1P05121 402 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 ARRB2P32121 409 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 CLCN2P51788 898 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 OLIG2Q13516 323 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 SCUBE3Q8IX30 993 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 EVPLQ92817 2033 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 MCRS1Q96EZ8 462 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 RTKNQ9BST9 563 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 FRMD8Q9BZ67 464 aaPredicted RBP24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 RNPEPQ9H4A4 650 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 PPP1R1BQ9UD71 204 aaPredicted RBP24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 DNAH12Q6ZR08 3092 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 C2CD4BA6NLJ0 364 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 ZBTB14O43829 449 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 SERPINB9P50453 376 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 IGBP1P78318 339 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 C1QTNF12Q5T7M4 302 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 TICAM1Q8IUC6 712 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 C10orf107Q8IVU9 208 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 ZBTB8OSQ8IWT0 167 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 HACE1Q8IYU2 909 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 RNF168Q8IYW5 571 aaPredicted RBP24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 CATSPER1Q8NEC5 780 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 GSDMBQ8TAX9 411 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 PGBD4Q96DM1 585 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 FAM96AQ9H5X1 160 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 RIMS3Q9UJD0 308 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 TSPAN16Q9UKR8 245 aa24.6■■□□□ 1.53
CSNK1E-203ENST00000396832 A0A1B0GTW7 788 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 MSX2P35548 267 aaPredicted RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 AP3M2P53677 418 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ACAP1Q15027 740 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 PDK1Q15118 436 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ADCY4Q8NFM4 1077 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 CNPY3Q9BT09 278 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 LIN28AQ9H9Z2 209 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 PCDH18Q9HCL0 1135 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 NRBP2Q9NSY0 501 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 RSL24D1Q9UHA3 163 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ZNF711Q9Y462 761 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ADCY6O43306 1168 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 IQCF3P0C7M6 154 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 SLC10A2Q12908 348 aaPredicted RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 CBLBQ13191 982 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 PCLAFQ15004 111 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 CCDC14Q49A88 953 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 TIFABQ6ZNK6 161 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ZNF280CQ8ND82 737 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 SIGLEC10Q96LC7 697 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 FAF1Q9UNN5 650 aaPredicted RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 SIP14410 1827 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 E9PBE3 544 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 AIM2O14862 343 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 KLHL41O60662 606 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ALDOAP04075 364 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 NDST1P52848 882 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 KLF10Q13118 480 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 TARBP2Q15633 366 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 ERI1Q8IV48 349 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 TNS4Q8IZW8 715 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 LILRA2Q8N149 483 aa24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 NIFKQ9BYG3 293 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 RPF1Q9H9Y2 349 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-203ENST00000396832 LACTBL1A8MY62 500 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 PLIN3O60664 434 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 ADRM1Q16186 407 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 FSCBQ5H9T9 825 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 FAM47CQ5HY64 1035 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 MPZL3Q6UWV2 235 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 CPB2Q96IY4 423 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 R3HDMLQ9H3Y0 253 aa24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 DHX35Q9H5Z1 703 aaKnown RBP24.58■■□□□ 1.53
CSNK1E-203ENST00000396832 BPTFQ12830 3046 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 CILPO75339 1184 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 MAFO75444 373 aaPredicted RBP24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 PRDX6P30041 224 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 FLOT2Q14254 428 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms