RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 RARBP10826 455 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 IL4RP24394 825 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 CXCR3P49682 368 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 NDUFV1P49821 464 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 IRF9Q00978 393 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SATB1Q01826 763 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ZNF460Q14592 562 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 KCNJ11Q14654 390 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 HSP90AA5PQ58FG0 334 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ATG16L1Q676U5 607 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ADGRF2Q8IZF7 708 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ZNF669Q96BR6 464 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 CELF6Q96J87 481 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 SCYL1Q96KG9 808 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 GCNAQ96QF7 691 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 WWP1Q9H0M0 922 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 VCXQ9H320 206 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 CORO1CQ9ULV4 474 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 SLC4A7Q9Y6M7 1214 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 PHGDHO43175 533 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 PEX1O43933 1283 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 TOMM70O94826 608 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ANPEPP15144 967 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 PEX2P28328 305 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 STIP1P31948 543 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 TAP1Q03518 808 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SOX4Q06945 474 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 INCA1Q0VD86 236 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SURF1Q15526 300 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 TAZQ16635 292 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 WASHC2DQ5SRD0 308 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 RPS27LQ71UM5 84 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 WDR75Q8IWA0 830 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 CCNYL1Q8N7R7 359 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 COLGALT1Q8NBJ5 622 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 CMASQ8NFW8 434 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 OR52K1Q8NGK4 314 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SLC2A14Q8TDB8 520 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ZNF184Q99676 751 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 ZNF518BQ9C0D4 1074 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 NRDE2Q9H7Z3 1164 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 KLHL8Q9P2G9 620 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 HBS1LQ9Y450 684 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 NUP205Q92621 2012 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 HMX2A2RU54 273 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 MEIS3P2A8K0S8 358 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 DYNC1LI2O43237 492 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 HSPA4LO95757 839 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SLC1A6P48664 564 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 HDAC4P56524 1084 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 BEX3Q00994 111 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 TMEM198Q66K66 360 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 RGMBQ6NW40 437 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 DRICH1Q6PGQ1 229 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 PAOXQ6QHF9 649 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 RELL1Q8IUW5 271 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ARRDC4Q8NCT1 418 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 ZSCAN18Q8TBC5 510 aaPredicted RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 EDEM1Q92611 657 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 NMD3Q96D46 503 aaKnown RBP9.54□□□□□ -0.88
NDE1-201ENST00000396354 OMDQ99983 421 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SYBUQ9NX95 663 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 TMEM216Q9P0N5 145 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 NUDT5Q9UKK9 219 aa9.54□□□□□ -0.88
NDE1-201ENST00000396354 SMIM10L2AP0DMW4 78 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 SMIM10L2BP0DMW5 78 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 ENO3P13929 434 aaPredicted RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 EPHA3P29320 983 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 GABRB2P47870 512 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 LAYNQ6UX15 382 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 ATG14Q6ZNE5 492 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 ALKBH8Q96BT7 664 aaKnown RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 TBCBQ99426 244 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 SIK2Q9H0K1 926 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 PLAC1Q9HBJ0 212 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 LRRC42Q9Y546 428 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 STX16-NPEPL1H3BU86 382 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 RNF103O00237 685 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 MFSD11O43934 449 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 SRGAP2BP0DMP2 458 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 PTPN7P35236 360 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 AFF1P51825 1210 aaKnown RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 ADIGQ0VDE8 80 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 ZRSR2Q15696 482 aaKnown RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 PDCD2Q16342 344 aaPredicted RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 PKDCCQ504Y2 493 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 CATSPER4Q7RTX7 472 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms