RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 IFFO1Q0D2I5 559 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 SLC29A2Q14542 456 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 TTMPQ5BVD1 217 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 SYCE2Q6PIF2 218 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 ZC3H18Q86VM9 953 aaKnown RBP19.9■□□□□ 0.78
LMNB1-202ENST00000395354 CCDC25Q86WR0 208 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 ARHGAP18Q8N392 663 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 FAM71DQ8N9W8 422 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 ATP6V1G3Q96LB4 118 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 TTLL2Q9BWV7 592 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 CDC42EP4Q9H3Q1 356 aaKnown RBP19.9■□□□□ 0.78
LMNB1-202ENST00000395354 PIDD1Q9HB75 910 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.9■□□□□ 0.78
LMNB1-202ENST00000395354 ADAM21Q9UKJ8 722 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 SCML2Q9UQR0 700 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 FARP1Q9Y4F1 1045 aaPredicted RBP19.9■□□□□ 0.78
LMNB1-202ENST00000395354 HEY1Q9Y5J3 304 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 GREB1Q4ZG55 1949 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 SYNJ2BP-COX16A0A087WUM0 186 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 PAPLNO95428 1278 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 TTC4O95801 387 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 POU2F2P09086 479 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 GOT1P17174 413 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 LTBRP36941 435 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 SEMA3BQ13214 749 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 EIF4EBP2Q13542 120 aaPredicted RBP19.89■□□□□ 0.77
LMNB1-202ENST00000395354 TERF2Q15554 542 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 RARS2Q5T160 578 aaKnown RBP19.89■□□□□ 0.77
LMNB1-202ENST00000395354 AGBL2Q5U5Z8 902 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 NCBP2-AS2Q69YL0 99 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 PYROXD2Q8N2H3 581 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 FAM76AQ8TAV0 307 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 PPM1EQ8WY54 764 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 SMG7Q92540 1137 aaKnown RBP19.89■□□□□ 0.77
LMNB1-202ENST00000395354 EDEM1Q92611 657 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 EXOC4Q96A65 974 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 ZBTB9Q96C00 473 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 TRMT2BQ96GJ1 504 aaKnown RBP19.89■□□□□ 0.77
LMNB1-202ENST00000395354 CORO1BQ9BR76 489 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 APOL5Q9BWW9 433 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 ARHGEF4Q9NR80 690 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 COX16Q9P0S2 106 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 PAK5Q9P286 719 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 RAD54BQ9Y620 910 aa19.89■□□□□ 0.77
LMNB1-202ENST00000395354 FAM92AA1XBS5 289 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 TBX10O75333 385 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 AMPD1P23109 780 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 ACTN2P35609 894 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 TAF10Q12962 218 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 SLC45A4Q5BKX6 768 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 BTBD8Q5XKL5 378 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 MON1AQ86VX9 555 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 OR2W6PQ8NHA6 318 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 DQX1Q8TE96 717 aaKnown RBP19.88■□□□□ 0.77
LMNB1-202ENST00000395354 PRCCQ92733 491 aaPredicted RBP19.88■□□□□ 0.77
LMNB1-202ENST00000395354 FBXO32Q969P5 355 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 WDCPQ9H6R7 721 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 PSD3Q9NYI0 1048 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 DNMT3BQ9UBC3 853 aaKnown RBP19.88■□□□□ 0.77
LMNB1-202ENST00000395354 UXTQ9UBK9 157 aaPredicted RBP19.88■□□□□ 0.77
LMNB1-202ENST00000395354 DOCK6Q96HP0 2047 aa19.88■□□□□ 0.77
LMNB1-202ENST00000395354 ZNF638Q14966 1978 aaKnown RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 EEF2KO00418 725 aaKnown RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 DPYSQ14117 519 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 PAFAH1B3Q15102 231 aaKnown RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 SKIV2LQ15477 1246 aaKnown RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 BRMS1LQ5PSV4 323 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 RFX8Q6ZV50 586 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 TAC4Q86UU9 113 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 HS6ST3Q8IZP7 471 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 NAT8LQ8N9F0 302 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 QKIQ96PU8 341 aaKnown RBP eCLIP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 RBM15Q96T37 977 aaKnown RBP eCLIP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 LRRC3Q9BY71 257 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 MAGEB5Q9BZ81 275 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 ROPN1BQ9BZX4 212 aaPredicted RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 SMOC2Q9H3U7 446 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 C10orf88Q9H8K7 445 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 ROPN1Q9HAT0 212 aaPredicted RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 ZNF334Q9HCZ1 680 aaPredicted RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 ASAH2Q9NR71 780 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 EIF3HO15372 352 aaKnown RBP eCLIP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 KCNN4O15554 427 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 GBE1Q04446 702 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 SLC10A2Q12908 348 aaPredicted RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 CBLBQ13191 982 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 EMC10Q5UCC4 262 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 PDZD4Q76G19 769 aaPredicted RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 GRASPQ7Z6J2 395 aaPredicted RBP19.87■□□□□ 0.77
LMNB1-202ENST00000395354 SCD5Q86SK9 330 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 GPR149Q86SP6 731 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 ADAM32Q8TC27 787 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 CPT1BQ92523 772 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 TTC25Q96NG3 672 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 OLFM3Q96PB7 478 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 OSBPL2Q9H1P3 480 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 DTLQ9NZJ0 730 aa19.87■□□□□ 0.77
LMNB1-202ENST00000395354 IRAK2O43187 625 aa19.86■□□□□ 0.77
LMNB1-202ENST00000395354 RHOP08100 348 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms