RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 DSG1Q02413 1049 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 UBE3AQ05086 875 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 EFEMP1Q12805 493 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 FASTKD3Q14CZ7 662 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 DNAJC21Q5F1R6 531 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 ANKRD20A2Q5SQ80 823 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 ANKRD20A1Q5TYW2 823 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 ANKRD20A3Q5VUR7 823 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 RWDD4Q6NW29 188 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 ARHGEF18Q6ZSZ5 1173 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 TP53INP2Q8IXH6 220 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 VPS52Q8N1B4 723 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 EPS8L3Q8TE67 593 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 P2RY11Q96G91 374 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 CEP295NLQ96MC4 621 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.95□□□□□ -0.34
SSH2-203ENST00000394848 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 A0A0A0MRY4 1105 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 H3BNC9 293 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 ZNF189O75820 626 aaPredicted RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 METTL18O95568 372 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 TBX18O95935 607 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MOCS2O96007 188 aaPredicted RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 APRTP07741 180 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 ATF6P18850 670 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MX2P20592 715 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 HTR7P34969 479 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SERPINB6P35237 376 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 LONRF1Q17RB8 773 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MSS51Q4VC12 460 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SYCP2LQ5T4T6 812 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 CCDC13Q8IYE1 715 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SPPL3Q8TCT6 385 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 PYROXD1Q8WU10 500 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SLC39A13Q96H72 371 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 C1orf74Q96LT6 269 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SPATA13Q96N96 652 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 FRMD8Q9BZ67 464 aaPredicted RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 BRD8Q9H0E9 1235 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 VWA8A3KMH1 1905 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 PTPRDP23468 1912 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 E7ESA3 106 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 RNF103O00237 685 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 BANF1O75531 89 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 TCEA3O75764 348 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 ABLIM3O94929 683 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 ABHD2P08910 425 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 NR1D1P20393 614 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MAGEA6P43360 314 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MAGOHP61326 146 aaKnown RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 STAT4Q14765 748 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 ANKMY2Q8IV38 441 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 NPWQ8N729 165 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SERPINB12Q96P63 405 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 HERC2P3Q9BVR0 1158 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 TTLL2Q9BWV7 592 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 VPS37BQ9H9H4 285 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
SSH2-203ENST00000394848 PSD3Q9NYI0 1048 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SEPT10Q9P0V9 454 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 SLC12A6Q9UHW9 1150 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 HS3ST4Q9Y661 456 aa12.94□□□□□ -0.34
SSH2-203ENST00000394848 E7EVH7 732 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 OPHN1O60890 802 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 SEC24AO95486 1093 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 HPDP32754 393 aaPredicted RBP12.93□□□□□ -0.34
SSH2-203ENST00000394848 LMAN1P49257 510 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 TUBP50607 506 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 GALNT2Q10471 571 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 AUHQ13825 339 aaKnown RBP12.93□□□□□ -0.34
SSH2-203ENST00000394848 TRIP4Q15650 581 aaPredicted RBP12.93□□□□□ -0.34
SSH2-203ENST00000394848 KDM7AQ6ZMT4 941 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 PALM2Q8IXS6 379 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 FBXO36Q8NEA4 188 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 TLCD1Q96CP7 247 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 TBC1D31Q96DN5 1066 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 STMN4Q9H169 189 aaPredicted RBP12.93□□□□□ -0.34
SSH2-203ENST00000394848 ZBP1Q9H171 429 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 HSFX1Q9UBD0 423 aa12.93□□□□□ -0.34
SSH2-203ENST00000394848 CDH23Q9H251 3354 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms