RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 A0A0A0MRY4 1105 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 AOC2O75106 756 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 GMPRP36959 345 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 COPAP53621 1224 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 SESN2P58004 480 aaPredicted RBP18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 POU5F1BQ06416 359 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 CCNIQ14094 377 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 SMAD1Q15797 465 aaKnown RBP18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 MORN1Q5T089 497 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 LRRC8BQ6P9F7 803 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 IFNLR1Q8IU57 520 aaPredicted RBP18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 ZFAND2BQ8WV99 257 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 TFB1MQ8WVM0 346 aaKnown RBP18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 PPP2R3CQ969Q6 453 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 KIF12Q96FN5 646 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 SPATA13Q96N96 652 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 OLFM3Q96PB7 478 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 CXCL16Q9H2A7 254 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 EBF3Q9H4W6 596 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 DNAJC28Q9NX36 388 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 FLRT1Q9NZU1 646 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 DCDC2Q9UHG0 476 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 GTF2IRD1Q9UHL9 959 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 ZNF195O14628 629 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 ADCY6O43306 1168 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 ITGA2BP08514 1039 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 FDFT1P37268 417 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 INHBEP58166 350 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 SREBF2Q12772 1141 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 HNRNPDQ14103 355 aaKnown RBP18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 TTLL4Q14679 1199 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 PPM1JQ5JR12 505 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 PGM2L1Q6PCE3 622 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 DHDDSQ86SQ9 333 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 COLGALT1Q8NBJ5 622 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 CDKL2Q92772 493 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 GBP5Q96PP8 586 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 TINF2Q9BSI4 451 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 FAM192AQ9GZU8 254 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 TMEM216Q9P0N5 145 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 USP3Q9Y6I4 520 aa18.84■□□□□ 0.61
PCDHA1-202ENST00000394633 PPEF2O14830 753 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 RNASEH1O60930 286 aaKnown RBP18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 PDE5AO76074 875 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 VTNP04004 478 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 INSRRP14616 1297 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 ALOX15P16050 662 aaPredicted RBP18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 GOT1P17174 413 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 EPHB1P54762 984 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 POLE2P56282 527 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 BTKQ06187 659 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 SOWAHAQ2M3V2 549 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 VWA5B1Q5TIE3 1220 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 PDSS2Q86YH6 399 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 PYROXD2Q8N2H3 581 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 ATP2A3Q93084 1043 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 LGMNQ99538 433 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 SHCBP1LQ9BZQ2 653 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 SNX9Q9Y5X1 595 aa18.83■□□□□ 0.6
PCDHA1-202ENST00000394633 RALGAPA2Q2PPJ7 1873 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 SNUPNO95149 360 aaKnown RBP18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 PGAM1P18669 254 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 TM4SF4P48230 202 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 ARHGAP1Q07960 439 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 CCL14Q16627 93 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 PDPK2PQ6A1A2 396 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 ZDHHC17Q8IUH5 632 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 NETO2Q8NC67 525 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 OR6Y1Q8NGX8 325 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 PPP4R1Q8TF05 950 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 ZFYVE28Q9HCC9 887 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 ZDHHC7Q9NXF8 308 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 IL1RAPL1Q9NZN1 696 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 AKT3Q9Y243 479 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 GRK2P25098 689 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 ABCE1P61221 599 aaKnown RBP18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 KYAT1Q16773 422 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 SFT2D3Q587I9 215 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 PRAMEF19Q5SWL8 479 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 SLC26A9Q7LBE3 791 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 LINC01465Q8N7H1 131 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 ACTRT2Q8TDY3 377 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 SLC26A7Q8TE54 656 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 HHIPL1Q96JK4 782 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 VTA1Q9NP79 307 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 SYBUQ9NX95 663 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 COPG2Q9UBF2 871 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 CDH22Q9UJ99 828 aa18.82■□□□□ 0.6
PCDHA1-202ENST00000394633 HACD1B0YJ81 288 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 HCRTO43612 131 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 HARS2P49590 506 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ASPHQ12797 758 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 NAB1Q13506 487 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 INSCQ1MX18 579 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 BSPRYQ5W0U4 402 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 LPCAT4Q643R3 524 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 CEP41Q9BYV8 373 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ARHGAP39Q9C0H5 1083 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 DPEP3Q9H4B8 488 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms