RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.74■□□□□ 0.27
TGFA-202ENST00000394241 LAMA1P25391 3075 aa16.74■□□□□ 0.27
TGFA-202ENST00000394241 CCDC163A0A0D9SF12 145 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 SOWAHDA6NJG2 315 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 SPECC1L-ADORA2AF8WAN1 911 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 IPO7O95373 1038 aaKnown RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 TFE3P19532 575 aaPredicted RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 CTHP32929 405 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 CHKAP35790 457 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 PXNP49023 591 aaPredicted RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 ZNF143P52747 638 aaPredicted RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 MTA1Q13330 715 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 DHCR24Q15392 516 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 C15orf59Q2T9L4 293 aaPredicted RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 CCDC14Q49A88 953 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 ZC3H12AQ5D1E8 599 aaKnown RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 BRMS1LQ5PSV4 323 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 C10orf76Q5T2E6 689 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 TCEAL6Q6IPX3 200 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 STRADAQ7RTN6 431 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 RALGPS2Q86X27 583 aaPredicted RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 SYNPOQ8N3V7 929 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 ATP6V0D2Q8N8Y2 350 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 TTC8Q8TAM2 541 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 GATA6Q92908 595 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 TCEAL3Q969E4 200 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 AZIN2Q96A70 460 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 EDEM2Q9BV94 578 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 PACSIN1Q9BY11 444 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 LUC7LQ9NQ29 371 aaKnown RBP16.73■□□□□ 0.27
TGFA-202ENST00000394241 SPHK2Q9NRA0 654 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 PIGVQ9NUD9 493 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 CALCOCO1Q9P1Z2 691 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
TGFA-202ENST00000394241 CCP110O43303 1012 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 ACSL4O60488 711 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 CYP1A2P05177 515 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 TMEM253P0C7T8 217 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 ADH5P11766 374 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 CXCR3P49682 368 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 AMPD2Q01433 879 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 CCINQ13939 588 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 PON2Q15165 354 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 SPA17Q15506 151 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 LY6G5CQ5SRR4 150 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 BNIPLQ7Z465 357 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 FAM217AQ8IXS0 508 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 ADGRG2Q8IZP9 1017 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 CPXM2Q8N436 756 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 FNIP1Q8TF40 1166 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 FAM172AQ8WUF8 416 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 ZCCHC14Q8WYQ9 949 aaKnown RBP16.72■□□□□ 0.27
TGFA-202ENST00000394241 ARHGEF26Q96DR7 871 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 ZC3H10Q96K80 434 aaKnown RBP16.72■□□□□ 0.27
TGFA-202ENST00000394241 BTN2A3PQ96KV6 586 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
TGFA-202ENST00000394241 CNPY3Q9BT09 278 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 NUP85Q9BW27 656 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 STOML2Q9UJZ1 356 aa16.72■□□□□ 0.27
TGFA-202ENST00000394241 TMEM191CA6NGB0 347 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 OTOL1A6NHN0 477 aaPredicted RBP16.71■□□□□ 0.27
TGFA-202ENST00000394241 C4orf47A7E2U8 309 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 KCNU1A8MYU2 1149 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.27
TGFA-202ENST00000394241 ENDOD1O94919 500 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 NDUFA10O95299 355 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 LCA5LO95447 670 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 TOP3BO95985 862 aaKnown RBP16.71■□□□□ 0.27
TGFA-202ENST00000394241 PSMA2P25787 234 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 GAD2Q05329 585 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 ADGRF1Q5T601 910 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 SH3PXD2AQ5TCZ1 1133 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 DAB2IPQ5VWQ8 1189 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 TPGS1Q6ZTW0 290 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 FAM131BQ86XD5 332 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 TMEM139Q8IV31 216 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 ZNF564Q8TBZ8 553 aaPredicted RBP16.71■□□□□ 0.27
TGFA-202ENST00000394241 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
TGFA-202ENST00000394241 SCNM1Q9BWG6 230 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 WDCPQ9H6R7 721 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 MARK1Q9P0L2 795 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 CTTNBP2NLQ9P2B4 639 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 UVRAGQ9P2Y5 699 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 ANAPC7Q9UJX3 599 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 INTUQ9ULD6 942 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
TGFA-202ENST00000394241 ATG2BQ96BY7 2078 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 WDFY3Q8IZQ1 3526 aa16.71■□□□□ 0.27
TGFA-202ENST00000394241 TYW5A2RUC4 315 aaKnown RBP16.7■□□□□ 0.26
TGFA-202ENST00000394241 HOXC11O43248 304 aaPredicted RBP16.7■□□□□ 0.26
TGFA-202ENST00000394241 CYBBP04839 570 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 GJA4P35212 333 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 OGDHQ02218 1023 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 ANO4Q32M45 955 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 FAM133BQ5BKY9 247 aaKnown RBP16.7■□□□□ 0.26
TGFA-202ENST00000394241 RHBDF2Q6PJF5 856 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 CHSY1Q86X52 802 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 CCDC112Q8NEF3 446 aa16.7■□□□□ 0.26
TGFA-202ENST00000394241 CENPIQ92674 756 aaPredicted RBP16.7■□□□□ 0.26
TGFA-202ENST00000394241 EXOC4Q96A65 974 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms