RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PRRX2Q99811 253 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 LRFN3Q9BTN0 628 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 NUP85Q9BW27 656 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 ADAM33Q9BZ11 813 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 SIK2Q9H0K1 926 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 LMAN1LQ9HAT1 526 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 C11orf16Q9NQ32 467 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 ARHGEF4Q9NR80 690 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 SPTLC3Q9NUV7 552 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 DNAJC17Q9NVM6 304 aaKnown RBP6.99□□□□□ -1.29
UBBP1-201ENST00000392399 CALCOCO1Q9P1Z2 691 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 NDRG2Q9UN36 371 aaKnown RBP6.99□□□□□ -1.29
UBBP1-201ENST00000392399 STARD13Q9Y3M8 1113 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 HS3ST4Q9Y661 456 aa6.99□□□□□ -1.29
UBBP1-201ENST00000392399 TICRRQ7Z2Z1 1910 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 IGLV3-10A0A075B6K4 115 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 A0A0A6YYK5 440 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 A0A1B0GVM2 712 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 TCAF2A6NFQ2 919 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 BTNL10A8MVZ5 291 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 CHURC1-FNTBB4DL54 471 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PRPSAP2O60256 369 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 TSPAN3O60637 253 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 LRCH4O75427 683 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PDGFBP01127 241 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 HOXD9P28356 352 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 SLC6A4P31645 630 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 L1CAMP32004 1257 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 MAN1A1P33908 653 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 SLC6A11P48066 632 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 ATXN1P54253 815 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 VCPP55072 806 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 HADHBP55084 474 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 CDH4P55283 916 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 MRPS21P82921 87 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 OGDHQ02218 1023 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 ZNF177Q13360 481 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 DMC1Q14565 340 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 EIF4HQ15056 248 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 HADHQ16836 314 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 EFHC2Q5JST6 749 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 ERMARDQ5T6L9 678 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 CWF19L1Q69YN2 538 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 FSTL4Q6MZW2 842 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 CHST9Q7L1S5 443 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 TRMT11Q7Z4G4 463 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 KIAA0907Q7Z7F0 614 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 SETD3Q86TU7 594 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 LRRC8AQ8IWT6 810 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 CCDC105Q8IYK2 499 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PHTF2Q8N3S3 785 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 SPEM1Q8N4L4 309 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 WFIKKN2Q8TEU8 576 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 UCMAQ8WVF2 138 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 UBE2Q2Q8WVN8 375 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 RFFLQ8WZ73 363 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 ARHGEF26Q96DR7 871 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 RPRD1AQ96P16 312 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 EPAS1Q99814 870 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PACSIN1Q9BY11 444 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 FOXQ1Q9C009 403 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 KCNH6Q9H252 994 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 CHRDQ9H2X0 955 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 FBRSL1Q9HCM7 1045 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PLK2Q9NYY3 685 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 DLGAP2Q9P1A6 1054 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 KIAA1522Q9P206 1035 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 OR12D3Q9UGF7 316 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 XPO7Q9UIA9 1087 aaKnown RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 ANAPC7Q9UJX3 599 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 VANGL2Q9ULK5 521 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 FZD10Q9ULW2 581 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 USP18Q9UMW8 372 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 MTF2Q9Y483 593 aaPredicted RBP6.98□□□□□ -1.29
UBBP1-201ENST00000392399 PCDHA13Q9Y5I0 950 aa6.98□□□□□ -1.29
UBBP1-201ENST00000392399 FAM86C2PA6NEL3 165 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 SOWAHDA6NJG2 315 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 E9PAM4 449 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 H0Y626 953 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 I6L893 689 aaPredicted RBP6.97□□□□□ -1.29
UBBP1-201ENST00000392399 K7EQS6 105 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 ARHGAP33O14559 1287 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 PJA2O43164 708 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 ARHGAP6O43182 974 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 PI15O43692 258 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 SRGAP2O75044 1071 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 PROSCO94903 275 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 LUC7L3O95232 432 aaKnown RBP6.97□□□□□ -1.29
UBBP1-201ENST00000392399 MOCS3O95396 460 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 EGFP01133 1207 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
UBBP1-201ENST00000392399 DCNP07585 359 aaKnown RBP6.97□□□□□ -1.29
UBBP1-201ENST00000392399 COL4A2P08572 1712 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 HNRNPLP14866 589 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBBP1-201ENST00000392399 MIPP30301 263 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 SLC1A1P43005 524 aa6.97□□□□□ -1.29
UBBP1-201ENST00000392399 HCAR3P49019 387 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms