RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SHOX2O60902 331 aaPredicted RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 BANF1O75531 89 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 APRTP07741 180 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 SRGAP2BP0DMP2 458 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 GARSP41250 739 aaKnown RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 SLCO1A2P46721 670 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZNF33AQ06730 810 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 EFEMP1Q12805 493 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCDC38Q502W7 563 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 DNAJC21Q5F1R6 531 aaKnown RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 HP1BP3Q5SSJ5 553 aaPredicted RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 RWDD4Q6NW29 188 aaKnown RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 NETO2Q8NC67 525 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 FBXO36Q8NEA4 188 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 OVCA2Q8WZ82 227 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 CDK5RAP1Q96SZ6 601 aaKnown RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 APOEP02649 317 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 URODP06132 367 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 PHBP35232 272 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 PPM1AP35813 382 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 LMAN1P49257 510 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 GPX6P59796 221 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 PPP2R2AP63151 447 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 CDK16Q00536 496 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 BBS9Q3SYG4 887 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 FAM182AQ5T1J6 154 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 SNX30Q5VWJ9 437 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 ANKMY2Q8IV38 441 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 GPR65Q8IYL9 337 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 RIBC1Q8N443 379 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 LZTR1Q8N653 840 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 PDZD8Q8NEN9 1154 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 YME1L1Q96TA2 773 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 VPS37BQ9H9H4 285 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 PPCSQ9HAB8 311 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 EIF2B3Q9NR50 452 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 LGALS13Q9UHV8 139 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 NR2E3Q9Y5X4 410 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
SMARCAL1-203ENST00000392128 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 E9PAM4 449 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 CDH16O75309 829 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 SEC24AO95486 1093 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 MOCS2O96007 188 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ATP5DP30049 168 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 HPDP32754 393 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 MAGEA3P43357 314 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 KPNA1P52294 538 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 COG7P83436 770 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 RING1Q06587 406 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 MTA1Q13330 715 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 RAB33AQ14088 237 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 PARP6Q2NL67 630 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 C10orf120Q5SQS8 335 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ACBD5Q5T8D3 534 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 PIK3R6Q5UE93 754 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 CAND1Q86VP6 1230 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZNF567Q8N184 647 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ATP6V0D2Q8N8Y2 350 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 EURLQ9NYK6 297 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 FNIP2Q9P278 1114 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 STK39Q9UEW8 545 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 FETUBQ9UGM5 382 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 SLC12A6Q9UHW9 1150 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 CLGNO14967 610 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 TBX18O95935 607 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ATP2A2P16615 1042 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 PTPN3P26045 913 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ELK3P41970 407 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 TUBP50607 506 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ATP1A2P50993 1020 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 IFI35P80217 286 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 SYCP2LQ5T4T6 812 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZNF534Q76KX8 674 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 OTOP2Q7RTS6 562 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 UBE2Q1Q7Z7E8 422 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 TDRPQ86YL5 185 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZNF683Q8IZ20 524 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 DPF3Q92784 378 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 LRRC39Q96DD0 335 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 BTN2A3PQ96KV6 586 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 VAT1Q99536 393 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 XAB2Q9HCS7 855 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 SEPT10Q9P0V9 454 aa11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-203ENST00000392128 TLR5O60602 858 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 SPAG6O75602 509 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CSH1P0DML2 217 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 CSH2P0DML3 217 aa11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 SARNPP82979 210 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-203ENST00000392128 HTRA4P83105 476 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms