RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FAM25AB3EWG3 89 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 FAM25CB3EWG5 89 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 FAM25GB3EWG6 89 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 CCNA2P20248 432 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 DNAJB2P25686 324 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 UGT3A1Q6NUS8 523 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 OR7A2PQ8NGA2 310 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 LNX1Q8TBB1 728 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 RXFP2Q8WXD0 754 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 ADAM30Q9UKF2 790 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 TM7SF2O76062 418 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 PDE9AO76083 593 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 CRABP2P29373 138 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 FLT3P36888 993 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 PSMC6P62333 389 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 C1DQ13901 141 aaKnown RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 C8orf59Q8N0T1 100 aaPredicted RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 ZSCAN18Q8TBC5 510 aaPredicted RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 DENND2DQ9H6A0 471 aaPredicted RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 DKK3Q9UBP4 350 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 TSR3Q9UJK0 312 aaKnown RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 AP4E1Q9UPM8 1137 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 A8MUI8 341 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 ALOX12P18054 663 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 NR2C2P49116 596 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 METTL7BQ6UX53 244 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 NAT14Q8WUY8 206 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 CYP3A43Q9HB55 503 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 ARHGEF3Q9NR81 526 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 PTTG2Q9NZH5 202 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 MATN2O00339 956 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 TRIM38O00635 465 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 CCDC166P0CW27 439 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 CHKAP35790 457 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 NAMPTP43490 491 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 TIMM50Q3ZCQ8 353 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 AADACL2Q6P093 401 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 TMC7Q7Z402 723 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 EFHBQ8N7U6 833 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 TADA1Q96BN2 335 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 SEMA6AQ9H2E6 1030 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 GRIN2DO15399 1336 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 GPR182O15218 404 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 LIASO43766 372 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 TRMUO75648 421 aaKnown RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 BAIAP3O94812 1187 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 HK2P52789 917 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 KRT73Q86Y46 540 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 ABHD8Q96I13 439 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 P2RX7Q99572 595 aaKnown RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 POP1Q99575 1024 aaKnown RBP20.1■□□□□ 0.81
SHANK1-203ENST00000391813 RNF112Q9ULX5 631 aa20.1■□□□□ 0.81
SHANK1-203ENST00000391813 F9P00740 461 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 ETS1P14921 441 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 VAC14Q08AM6 782 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 DDR2Q16832 855 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 RNF219Q5W0B1 726 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 ZNF572Q7Z3I7 529 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 C4orf19Q8IY42 314 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 REM2Q8IYK8 340 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 BTBD9Q96Q07 612 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 WDR18Q9BV38 432 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 GPRC5CQ9NQ84 441 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 ARL8BQ9NVJ2 186 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 PMPCBO75439 489 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 PDGFRBP09619 1106 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 ADSSP30520 456 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 DCAF4L1Q3SXM0 396 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 WDR49Q8IV35 697 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 ALLCQ8N6M5 410 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 EMC1Q8N766 993 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 PTCD3Q96EY7 689 aaKnown RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 RNF145Q96MT1 663 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 ASB2Q96Q27 587 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 S100A14Q9HCY8 104 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 FAM20BO75063 409 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 VGLL4Q14135 290 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 CBWD6Q4V339 395 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 CBWD3Q5JTY5 395 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 CBWD5Q5RIA9 395 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 PTRHD1Q6GMV3 140 aaKnown RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 AMER2Q8N7J2 671 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 CAPSLQ8WWF8 208 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 FANCEQ9HB96 536 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 FBXO6Q9NRD1 293 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 CACNA2D2Q9NY47 1150 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 TRMT6Q9UJA5 497 aaKnown RBP20.09■□□□□ 0.81
SHANK1-203ENST00000391813 SLC12A4Q9UP95 1085 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 FRMPD4Q14CM0 1322 aa20.09■□□□□ 0.81
SHANK1-203ENST00000391813 TGDSO95455 350 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 AKR1A1P14550 325 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 NUDT18Q6ZVK8 323 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 BNIPLQ7Z465 357 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 C19orf60Q96EN9 201 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 OLFM1Q99784 485 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 ANAPC2Q9UJX6 822 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms