RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MAGEH1Q9H213 219 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CHST8Q9H2A9 424 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DHX36Q9H2U1 1008 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ABHD16BQ9H3Z7 469 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 FAM83DQ9H4H8 585 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PRDM16Q9HAZ2 1276 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ATP6V0A4Q9HBG4 840 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SPC25Q9HBM1 224 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ERVK-5Q9HDB9 667 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SPAG4Q9NPE6 437 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 STK32BQ9NY57 414 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DDX56Q9NY93 547 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DKK4Q9UBT3 224 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MALT1Q9UDY8 824 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 VPS51Q9UID3 782 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 B3GNT3Q9Y2A9 372 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DTX4Q9Y2E6 619 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ANKRD6Q9Y2G4 727 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PRKAB1Q9Y478 270 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SPEF1Q9Y4P9 236 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PAXBP1Q9Y5B6 917 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SMAD5-AS1Q9Y6J3 95 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 COL2A1P02458 1487 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 IGKV3D-15A0A087WSY6 115 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 SAA2-SAA4A0A096LPE2 208 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 IGKV6D-41A0A0C4DH26 115 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 LINC01553A4QN01 128 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TRIM43BA6NCK2 446 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CXorf65A6NEN9 183 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 SAC3D1A6NKF1 404 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MS4A18H0YCH9 400 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 H3BML4 177 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 STMND1H3BQB6 276 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 VWA5AO00534 786 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CLGNO14967 610 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ZSCAN9O15535 394 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ASAP2O43150 1006 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MSI1O43347 362 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 XPNPEP2O43895 674 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 KCNJ13O60928 360 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 COQ9O75208 318 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 INMTO95050 263 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 SGPL1O95470 568 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 APOHP02749 345 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CFC1BP0CG36 223 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CFC1P0CG37 223 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 IL1R1P14778 569 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 AMD1P17707 334 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CHRNB2P17787 502 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MATN1P21941 496 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TGM2P21980 687 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MMP8P22894 467 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 HOXC13P31276 330 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ATICP31939 592 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GSTM5P46439 218 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GLIPR1P48060 266 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 NOVP48745 357 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CARSP49589 748 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ATP12AP54707 1039 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 SELENOVP59797 346 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ZP1P60852 638 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ERVK11-1P61568 191 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 RPS16P62249 146 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 DMWDQ09019 674 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ARL16Q0P5N6 197 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TRAF3Q13114 568 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GALNT3Q14435 633 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ACOX1Q15067 660 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 SLC1A5Q15758 541 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CNGA2Q16280 664 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM196Q5HYL7 178 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM240Q5SV17 173 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 LCE3AQ5TA76 89 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 RRAGBQ5VZM2 374 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 PLEKHA7Q6IQ23 1121 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 C8orf82Q6P1X6 216 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ACSM6Q6P461 480 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 RHBDF2Q6PJF5 856 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF474Q6S9Z5 364 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GDPD4Q6W3E5 623 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 Q6ZSV7 163 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 C9orf139Q6ZV77 190 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 UNC13DQ70J99 1090 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MAEAQ7L5Y9 396 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TRMT1LQ7Z2T5 733 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 KDELC2Q7Z4H8 507 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ZBTB46Q86UZ6 589 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 EXOC3L1Q86VI1 746 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 DCUN1D3Q8IWE4 304 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 KLHDC8BQ8IXV7 354 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 LAS2Q8IYD9 372 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TCP11L2Q8N4U5 519 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MAB21L3Q8N8X9 362 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 IL17RCQ8NAC3 791 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MIGA1Q8NAN2 632 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 PRPF38AQ8NAV1 312 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 OR52L2PQ8NGH6 319 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 LILRB1Q8NHL6 650 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 MBD3L2Q8NHZ7 208 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms