RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 MBLAC2Q68D91 279 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 CASC4Q6P4E1 433 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 CXCL17Q6UXB2 119 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 PACS1Q6VY07 963 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 COLGALT1Q8NBJ5 622 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 KLHDC9Q8NEP7 349 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 KBTBD7Q8WVZ9 684 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 ARNTL2Q8WYA1 636 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 CLPTM1LQ96KA5 538 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 RILPQ96NA2 401 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 WASF2Q9Y6W5 498 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 SCN1AP35498 2009 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 KAT6AQ92794 2004 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 DPPA5A6NC42 116 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 SDR42E2A6NKP2 422 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 SPECC1L-ADORA2AF8WAN1 911 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 LYPLA1O75608 230 aaPredicted RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 SERPINA6P08185 405 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 SCNN1AP37088 669 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 BCAT1P54687 386 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 TMEM62Q0P6H9 643 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 PDE1CQ14123 709 aaPredicted RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 UBAP2LQ14157 1087 aaKnown RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 TEDDM1Q5T9Z0 273 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 N4BP2L1Q5TBK1 243 aaPredicted RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 C9orf57Q5W0N0 161 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 CCSAPQ6IQ19 270 aaPredicted RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 LRRC8BQ6P9F7 803 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 FAM131BQ86XD5 332 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.24□□□□□ -0.13
NEK4-202ENST00000383721 GINS2Q9Y248 185 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 PSAT1Q9Y617 370 aa14.24□□□□□ -0.13
NEK4-202ENST00000383721 KIAA0100Q14667 2235 aaKnown RBP14.24□□□□□ -0.13
NEK4-202ENST00000383721 TPP1O14773 563 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 MFSD11O43934 449 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 TM7SF2O76062 418 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 FGF3P11487 239 aaPredicted RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 MGAT1P26572 445 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 FDFT1P37268 417 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 TUBP50607 506 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 SESN2P58004 480 aaPredicted RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 MRPS35P82673 323 aaKnown RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 TUBB3Q13509 450 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 ZNF410Q86VK4 478 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 SCUBE1Q8IWY4 988 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 BEST2Q8NFU1 509 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 ACMSDQ8TDX5 336 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 CEP41Q9BYV8 373 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 SPC25Q9HBM1 224 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 HACD1B0YJ81 288 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 F8W8V4 182 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 PLIN3O60664 434 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 ASGR1P07306 291 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 PURAQ00577 322 aaKnown RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 KLC1Q07866 573 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 SMAD1Q15797 465 aaKnown RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 ZNF618Q5T7W0 954 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 COL13A1Q5TAT6 717 aaPredicted RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 ATG14Q6ZNE5 492 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 STRADAQ7RTN6 431 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 ULK2Q8IYT8 1036 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 CRYBG2Q8N1P7 616 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 NDRG1Q92597 394 aaKnown RBP14.23□□□□□ -0.13
NEK4-202ENST00000383721 PANX3Q96QZ0 392 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 APOL6Q9BWW8 343 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 TMPRSS4Q9NRS4 437 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 FZD10Q9ULW2 581 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
NEK4-202ENST00000383721 FRMPD3Q5JV73 1810 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 RNF103O00237 685 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 SPTLC1O15269 473 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 PRKCGP05129 697 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 ATP5BP06576 529 aaKnown RBP14.22□□□□□ -0.13
NEK4-202ENST00000383721 KCNA4P22459 653 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 ARL4AP40617 200 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 AP1B1Q10567 949 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 TBCCQ15814 346 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 DBN1Q16643 649 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 SLC27A1Q6PCB7 646 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 NET1Q7Z628 596 aaPredicted RBP14.22□□□□□ -0.13
NEK4-202ENST00000383721 PIWIL2Q8TC59 973 aaKnown RBP14.22□□□□□ -0.13
NEK4-202ENST00000383721 SLC2A14Q8TDB8 520 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 UCMAQ8WVF2 138 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 P2RY11Q96G91 374 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 SYT15Q9BQS2 421 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 THTPAQ9BU02 230 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 ADAMTS10Q9H324 1103 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 CDHR5Q9HBB8 845 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 KRT82Q9NSB4 513 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 ZNF212Q9UDV6 495 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 SLC7A8Q9UHI5 535 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 LRCH1Q9Y2L9 728 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 GLRA3O75311 464 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 GNL1P36915 607 aaPredicted RBP14.22□□□□□ -0.13
NEK4-202ENST00000383721 MATKP42679 507 aa14.22□□□□□ -0.13
NEK4-202ENST00000383721 PITX1P78337 314 aaPredicted RBP14.22□□□□□ -0.13
NEK4-202ENST00000383721 NKX3-2P78367 333 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms