RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ZNF135P52742 658 aaPredicted RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 IQSEC1Q6DN90 963 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 C16orf89Q6UX73 402 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 CYP2R1Q6VVX0 501 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 DSELQ8IZU8 1212 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 LARGE2Q8N3Y3 721 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 ZNF420Q8TAQ5 688 aaPredicted RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 C2orf49Q9BVC5 232 aaPredicted RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 RAB20Q9NX57 234 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 XPO7Q9UIA9 1087 aaKnown RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 ASTN2O75129 1339 aaPredicted RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 ESYT2A0FGR8 921 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 ZBTB39O15060 712 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 HTRA2O43464 458 aaPredicted RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 SNRPAP09012 282 aaKnown RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 HSPA1AP0DMV8 641 aaKnown RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 HSPA1BP0DMV9 641 aaKnown RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 ME2P23368 584 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 STX1BP61266 288 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 RACK1P63244 317 aaKnown RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 KLF10Q13118 480 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 KLF1Q13351 362 aaPredicted RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 TEX44Q53QW1 395 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 SLC30A10Q6XR72 485 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 CPSF7Q8N684 471 aaKnown RBP15.39■□□□□ 0.05
VLDLR-202ENST00000382099 ADAM32Q8TC27 787 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 HCAR2Q8TDS4 363 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 VPS35Q96QK1 796 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 PSD2Q9BQI7 771 aa15.39■□□□□ 0.05
VLDLR-202ENST00000382099 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 C8BP07358 591 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 NFX1Q12986 1120 aaKnown RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 SLC13A2Q13183 592 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 SNAP47Q5SQN1 464 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 TTC39BQ5VTQ0 682 aaPredicted RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 PMEPA1Q969W9 287 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 CDHR1Q96JP9 859 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 SNTG2Q9NY99 539 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 RNF103-CHMP3A0A140T963 221 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 TCRBV7S3A2A0A539 114 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 AKAP10O43572 662 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 JRKO75564 520 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 NTSR2O95665 410 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 IL1BP01584 269 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 BPGMP07738 259 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 SLC12A3P55017 1021 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 SMAD1Q15797 465 aaKnown RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 UGT3A1Q6NUS8 523 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 TMEM102Q8N9M5 508 aaPredicted RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 RCN3Q96D15 328 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 ZNF347Q96SE7 839 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 NAP1L4Q99733 375 aaKnown RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 UCKL1Q9NWZ5 548 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 UGT2A1Q9Y4X1 527 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 HOXC11O43248 304 aaPredicted RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 DCKP27707 260 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 TTKP33981 857 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 NAMPTP43490 491 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 LGSNQ5TDP6 509 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 USP37Q86T82 979 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 ABHD11Q8NFV4 315 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.38■□□□□ 0.05
VLDLR-202ENST00000382099 RSAD2Q8WXG1 361 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 VCPIP1Q96JH7 1222 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 ZNF597Q96LX8 424 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 IL12RB2Q99665 862 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 SIRPGQ9P1W8 387 aa15.38■□□□□ 0.05
VLDLR-202ENST00000382099 E2F8A0AVK6 867 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 TPST1O60507 370 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 SLITRK3O94933 977 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 ATP5BP06576 529 aaKnown RBP15.37■□□□□ 0.05
VLDLR-202ENST00000382099 MATN1P21941 496 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 ATICP31939 592 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 GNL1P36915 607 aaPredicted RBP15.37■□□□□ 0.05
VLDLR-202ENST00000382099 PPP2R2BQ00005 443 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 CEACAM7Q14002 265 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 PPIL6Q8IXY8 311 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 NAT16Q8N8M0 369 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 SLC44A1Q8WWI5 657 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 PGBD4Q96DM1 585 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 EGLN2Q96KS0 407 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 C8orf37Q96NL8 207 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 RTKNQ9BST9 563 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 BOLA1Q9Y3E2 137 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 A0A0B4J269 797 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 PRSS51A0A1B0GVH4 220 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.37■□□□□ 0.05
VLDLR-202ENST00000382099 ZBTB14O43829 449 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 NUAK1O60285 661 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 NADKO95544 446 aaPredicted RBP15.37■□□□□ 0.05
VLDLR-202ENST00000382099 P2RX3P56373 397 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
VLDLR-202ENST00000382099 EN1Q05925 392 aaPredicted RBP15.37■□□□□ 0.05
VLDLR-202ENST00000382099 TUBB3Q13509 450 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 NXNQ6DKJ4 435 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 GALNT13Q8IUC8 556 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 IGDCC3Q8IVU1 814 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 CEP95Q96GE4 821 aa15.37■□□□□ 0.05
VLDLR-202ENST00000382099 SH3YL1Q96HL8 342 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms