RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 CASC4Q6P4E1 433 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 FAM171BQ6P995 826 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 SH2D5Q6ZV89 423 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 TAC4Q86UU9 113 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 CELF6Q96J87 481 aaKnown RBP17.66■□□□□ 0.42
PDX1-201ENST00000381033 DNAI2Q9GZS0 605 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 MMADHCQ9H3L0 296 aaPredicted RBP17.66■□□□□ 0.42
PDX1-201ENST00000381033 HAUS2Q9NVX0 235 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 FBXW11Q9UKB1 542 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 SMG5Q9UPR3 1016 aaKnown RBP17.66■□□□□ 0.42
PDX1-201ENST00000381033 IKBKGQ9Y6K9 419 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 HMX2A2RU54 273 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 MT-ND3P03897 115 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 PCSK1P29120 753 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 ACLYP53396 1101 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 SFSWAPQ12872 951 aaKnown RBP17.65■□□□□ 0.42
PDX1-201ENST00000381033 SEMA5AQ13591 1074 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 PRKD1Q15139 912 aaPredicted RBP17.65■□□□□ 0.42
PDX1-201ENST00000381033 OVOS1Q6IE37 1185 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 ECHDC2Q86YB7 292 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 B4GALNT2Q8NHY0 566 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 FAM111AQ96PZ2 611 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 SIK2Q9H0K1 926 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 PRKAG3Q9UGI9 489 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 MSI1O43347 362 aaKnown RBP17.65■□□□□ 0.42
PDX1-201ENST00000381033 APOEP02649 317 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 SRGAP2BP0DMP2 458 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 OVGP1Q12889 678 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 SEMA3BQ13214 749 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 TUSC3Q13454 348 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 PDK4Q16654 411 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 PREPLQ4J6C6 727 aaPredicted RBP17.65■□□□□ 0.42
PDX1-201ENST00000381033 PID1Q7Z2X4 250 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 LRRC6Q86X45 466 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 PKMYT1Q99640 499 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 EBNA1BP2Q99848 306 aaKnown RBP17.65■□□□□ 0.42
PDX1-201ENST00000381033 GORASP1Q9BQQ3 440 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 WDCPQ9H6R7 721 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 CSNK1G1Q9HCP0 422 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 SENP1Q9P0U3 644 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 DNAJB4Q9UDY4 337 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 OR12D3Q9UGF7 316 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 FETUBQ9UGM5 382 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 SFMBT1Q9UHJ3 866 aa17.65■□□□□ 0.42
PDX1-201ENST00000381033 CKBP12277 381 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 MGAT1P26572 445 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 GMPRP36959 345 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 TPI1P60174 286 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 SP3Q02447 781 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 MROH9Q5TGP6 573 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
PDX1-201ENST00000381033 CD99L2Q8TCZ2 262 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 ZNF75CPQ92670 426 aaPredicted RBP17.64■□□□□ 0.41
PDX1-201ENST00000381033 OXNAD1Q96HP4 312 aaPredicted RBP17.64■□□□□ 0.41
PDX1-201ENST00000381033 B3GALT6Q96L58 329 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 ACBD6Q9BR61 282 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 SLC13A1Q9BZW2 595 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 PRG3Q9Y2Y8 225 aaPredicted RBP17.64■□□□□ 0.41
PDX1-201ENST00000381033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.64■□□□□ 0.41
PDX1-201ENST00000381033 LPXNO60711 386 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 LRIG2O94898 1065 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 SUN1O94901 812 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 SESN3P58005 492 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 ZNF598Q86UK7 904 aaKnown RBP17.64■□□□□ 0.41
PDX1-201ENST00000381033 MCUQ8NE86 351 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 UBP1Q9NZI7 540 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 HCSTQ9UBK5 93 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 ITM2BQ9Y287 266 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 PTCH2Q9Y6C5 1203 aa17.64■□□□□ 0.41
PDX1-201ENST00000381033 PEX14O75381 377 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 TRPA1O75762 1119 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 FBXO21O94952 628 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 MYCP01106 439 aaPredicted RBP17.63■□□□□ 0.41
PDX1-201ENST00000381033 EPHB2P29323 1055 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 ABL2P42684 1182 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 GPR15P49685 360 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 NKX3-2P78367 333 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 PAFAH1B3Q15102 231 aaKnown RBP17.63■□□□□ 0.41
PDX1-201ENST00000381033 LACTB2Q53H82 288 aaPredicted RBP17.63■□□□□ 0.41
PDX1-201ENST00000381033 CLLU1OSQ5K130 101 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 SLC26A11Q86WA9 606 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 GPR152Q8TDT2 470 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 LRRC8CQ8TDW0 803 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 ARNTL2Q8WYA1 636 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 APOL2Q9BQE5 337 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 MECRQ9BV79 373 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 TRIM33Q9UPN9 1127 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 TPSB2P20231 275 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 PRKCHP24723 683 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 GBP2P32456 591 aaPredicted RBP17.63■□□□□ 0.41
PDX1-201ENST00000381033 TPSAB1Q15661 275 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 ARHGAP36Q6ZRI8 547 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 OTOAQ7RTW8 1153 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 DQX1Q8TE96 717 aaKnown RBP17.63■□□□□ 0.41
PDX1-201ENST00000381033 RNF34Q969K3 372 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 TTC17Q96AE7 1141 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 PGBD4Q96DM1 585 aa17.63■□□□□ 0.41
PDX1-201ENST00000381033 RCOR3Q9P2K3 495 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms