RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 AIPL1Q9NZN9 384 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 ADAM22Q9P0K1 906 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 STIM2Q9P246 746 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SLC12A6Q9UHW9 1150 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 STOML2Q9UJZ1 356 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 STAP1Q9ULZ2 295 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 USP18Q9UMW8 372 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SLC8A2Q9UPR5 921 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 TMCO5BA8MYB1 307 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CHURC1-FNTBB4DL54 471 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 TBL1XO60907 577 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 GJB6O95452 261 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 S1PR4O95977 384 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CALB1P05937 261 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 RETP07949 1114 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CISD3P0C7P0 127 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 SLC2A3P11169 496 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 TFE3P19532 575 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 SLC6A4P31645 630 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CCR1P32246 355 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 FLT3P36888 993 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 TNFRSF4P43489 277 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 ZBED6P86452 979 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 DEUP1Q05D60 604 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 PPP2R5DQ14738 602 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 TDRD12Q587J7 1177 aaKnown RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 EMC10Q5UCC4 262 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 RAP1GAP2Q684P5 730 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 ACAD10Q6JQN1 1059 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 ZNF571Q7Z3V5 609 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CHSY1Q86X52 802 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 PHF13Q86YI8 300 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 PHTF2Q8N3S3 785 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 EMC1Q8N766 993 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 TERB1Q8NA31 727 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 USP33Q8TEY7 942 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 AZIN2Q96A70 460 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 ACDQ96AP0 544 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 IQCDQ96DY2 449 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 P2RY11Q96G91 374 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 BTN2A3PQ96KV6 586 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CFAP57Q96MR6 1250 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 NPY6RQ99463 290 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 SELENOOQ9BVL4 669 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 NUCKS1Q9H1E3 243 aaKnown RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 ZDHHC4Q9NPG8 344 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 C2orf42Q9NWW7 574 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 RRN3Q9NYV6 651 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 XPO7Q9UIA9 1087 aaKnown RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 RAB23Q9ULC3 237 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 CAPN11Q9UMQ6 739 aa9.57□□□□□ -0.88
HMGN1-202ENST00000380747 LUC7L2Q9Y383 392 aaKnown RBP9.57□□□□□ -0.88
HMGN1-202ENST00000380747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.57□□□□□ -0.881e-14■■■□□ 15.4
HMGN1-202ENST00000380747 ITIH6Q6UXX5 1313 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 TYW5A2RUC4 315 aaKnown RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 KCNU1A8MYU2 1149 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 KLF8O95600 359 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 F9P00740 461 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 KRT3P12035 628 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 TACR2P21452 398 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 HOXD9P28356 352 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 HOXC13P31276 330 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PRKCIP41743 596 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 WASP42768 502 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 SGSHP51688 502 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 MRPS21P82921 87 aaKnown RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PTP4A2Q12974 167 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 DMC1Q14565 340 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 SLC25A52Q3SY17 297 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 FAM133BQ5BKY9 247 aaKnown RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PPM1JQ5JR12 505 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PIK3R6Q5UE93 754 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 OTUD1Q5VV17 481 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 SPECC1LQ69YQ0 1117 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 TRNP1Q6NT89 227 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 DNAJC24Q6P3W2 148 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 MON1BQ7L1V2 547 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 LGI2Q8N0V4 545 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 CFAP52Q8N1V2 620 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 ALLCQ8N6M5 410 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 HJURPQ8NCD3 748 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 JOSD2Q8TAC2 188 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 RXFP2Q8WXD0 754 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 MYEOVQ96EZ4 313 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PRICKLE1Q96MT3 831 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 TBCBQ99426 244 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 SYT11Q9BT88 431 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PIGVQ9NUD9 493 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 TAS2R14Q9NYV8 317 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 CALCOCO1Q9P1Z2 691 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 TMEM59LQ9UK28 342 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 FBXO10Q9UK96 956 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 CLEC4EQ9ULY5 219 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
HMGN1-202ENST00000380747 WDFY3Q8IZQ1 3526 aa9.56□□□□□ -0.88
HMGN1-202ENST00000380747 PRRT4C9JH25 899 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms