RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 NOMO1Q15155 1222 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 PID1Q7Z2X4 250 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 ABI1Q8IZP0 508 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TTC39CQ8N584 583 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 OR10T2Q8NGX3 314 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 PGM2Q96G03 612 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TRABDQ9H4I3 376 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 UGT1A7Q9HAW7 530 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 UGT1A10Q9HAW8 530 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 UGT1A8Q9HAW9 530 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 SLC38A7Q9NVC3 462 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 EEF2KO00418 725 aaKnown RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 FAM107AO95990 144 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 SAT1P21673 171 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 MSH2P43246 934 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 GKAP1Q5VSY0 366 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 SLC26A9Q7LBE3 791 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 PRPF39Q86UA1 669 aaKnown RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 METTL23Q86XA0 190 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 MIB1Q86YT6 1006 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 RNF139Q8WU17 664 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 STMN4Q9H169 189 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 SLCO1B3Q9NPD5 702 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 FANCFQ9NPI8 374 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 DTLQ9NZJ0 730 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 DRG1Q9Y295 367 aaKnown RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 CLUHO75153 1309 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 DFFAO00273 331 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 XPO1O14980 1071 aaKnown RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 RPA3P35244 121 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 EFHC2Q5JST6 749 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 CACNA2D3Q8IZS8 1091 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 ATAD1Q8NBU5 361 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 ZMIZ2Q8NF64 920 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 SEC16BQ96JE7 1060 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TGS1Q96RS0 853 aaKnown RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 SMC6Q96SB8 1091 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 PAFAH2Q99487 392 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 WDR83Q9BRX9 315 aaKnown RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TKTL2Q9H0I9 626 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 STAP1Q9ULZ2 295 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 DDHD2O94830 711 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 INHAP05111 366 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 GMPRP36959 345 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 MMP13P45452 471 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 UPP1Q16831 310 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 ARHGAP17Q68EM7 881 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 GLB1LQ6UWU2 654 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 VSTM1Q6UX27 236 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 POPDC2Q9HBU9 364 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 SAMD15Q9P1V8 674 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 KLHL8Q9P2G9 620 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 ZC3H7BQ9UGR2 993 aaKnown RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TADA2AO75478 443 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TOP3BO95985 862 aaKnown RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 CPP00450 1065 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 CKBP12277 381 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TPH1P17752 444 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TPI1P60174 286 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 OVGP1Q12889 678 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 NOGQ13253 232 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 MROH9Q5TGP6 573 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 CHPFQ8IZ52 775 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 NAT8LQ8N9F0 302 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 C7orf57Q8NEG2 295 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 SERPINB12Q96P63 405 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 HNRNPABQ99729 332 aaKnown RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 KLC2Q9H0B6 622 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 ARHGEF4Q9NR80 690 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 MTMR10Q9NXD2 777 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 ACAD8Q9UKU7 415 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TRIM17Q9Y577 477 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 CAPN7Q9Y6W3 813 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 I6L893 689 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 ATP9BO43861 1147 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TBX18O95935 607 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 LTFP02788 710 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 INHBAP08476 426 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 ODC1P11926 461 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 CLNS1AP54105 237 aaKnown RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 YWHAHQ04917 246 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 PDK2Q15119 407 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 TRMT10BQ6PF06 316 aaKnown RBP11.11□□□□□ -0.63
NEDD9-201ENST00000379433 CCDC121Q6ZUS5 278 aa11.11□□□□□ -0.63
NEDD9-201ENST00000379433 SPATA2LQ8IUW3 424 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms