RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ABCC13Q9NSE7 274 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 STOML2Q9UJZ1 356 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 RAI2Q9Y5P3 530 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 SETXQ7Z333 2677 aaKnown RBP18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 TYW5A2RUC4 315 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 TTC34A8MYJ7 566 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 E9PAM4 449 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 LATS1O95835 1130 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 EPB41P11171 864 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 CD38P28907 300 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 GTF2H1P32780 548 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 CTSOP43234 321 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 RPS24P62847 133 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 LRMPQ12912 555 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 CDH18Q13634 790 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 SHBQ15464 509 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 NFIL3Q16649 462 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 SMYD4Q8IYR2 804 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 HJURPQ8NCD3 748 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 OR14C36Q8NHC7 312 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 MYO19Q96H55 970 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 SERAC1Q96JX3 654 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 FCRL3Q96P31 734 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 GDF3Q9NR23 364 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 PCDHGA1Q9Y5H4 931 aa18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 COL5A1P20908 1838 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-202ENST00000379018 HELZ2Q9BYK8 2649 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 RRP8O43159 456 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 PAPSS1O43252 624 aaPredicted RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 ACSL4O60488 711 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 RHOBTB3O94955 611 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 MOCS2O96007 188 aaPredicted RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 ACADVLP49748 655 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 TBX4P57082 545 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 DAOAP59103 153 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 CUL2Q13617 745 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 HNRNPA1L2Q32P51 320 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 FAM133BQ5BKY9 247 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 NADSYN1Q6IA69 706 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 CCDC117Q8IWD4 279 aaPredicted RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 CFAP52Q8N1V2 620 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 OR2T34Q8NGX1 318 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 SAP25Q8TEE9 199 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 CLEC4CQ8WTT0 213 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 MYEOVQ96EZ4 313 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 PRICKLE1Q96MT3 831 aaPredicted RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 USP25Q9UHP3 1055 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 RCOR1Q9UKL0 485 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 INTS6Q9UL03 887 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 SCML1Q9UN30 329 aa18.45■□□□□ 0.54
PDLIM4-202ENST00000379018 PTPRQQ9UMZ3 2332 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 STX10O60499 249 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 C1QL1O75973 258 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 MYL1P05976 194 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 EPHA8P29322 1005 aaPredicted RBP18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 SLC8A1P32418 973 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 SYKP43405 635 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 ARRB1P49407 418 aaPredicted RBP18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 SFSWAPQ12872 951 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 BNIP3Q12983 259 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 CBWD6Q4V339 395 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 CBWD3Q5JTY5 395 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 CBWD5Q5RIA9 395 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 NUGGCQ68CJ6 796 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 STK40Q8N2I9 435 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 GUF1Q8N442 669 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 CNGB3Q9NQW8 809 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 ERVW-1Q9UQF0 538 aa18.44■□□□□ 0.54
PDLIM4-202ENST00000379018 NYNRINQ9P2P1 1898 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 FLNBO75369 2602 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 O00370 1275 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 ASLP04424 464 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 SETSIPP0DME0 302 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 CMA1P23946 247 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 YWHAEP62258 255 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 PPP2CBP62714 309 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 PPP2CAP67775 309 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 ENPEPQ07075 957 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 CCDC173Q0VFZ6 552 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 DPYDQ12882 1025 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 SLC45A4Q5BKX6 768 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 FSCBQ5H9T9 825 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 PITRM1Q5JRX3 1037 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 C9orf64Q5T6V5 341 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 RNF219Q5W0B1 726 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 ATL3Q6DD88 541 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 MSANTD2Q6P1R3 559 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 AADATQ8N5Z0 425 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 FIBINQ8TAL6 211 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 BAP1Q92560 729 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 TTC17Q96AE7 1141 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 RPL10LQ96L21 214 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 MRGPRX3Q96LB0 322 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 MIS12Q9H081 205 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 NUCKS1Q9H1E3 243 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 PRORYQ9H606 182 aa18.43■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3DA0A087WVF3 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3IA0A087WXS9 549 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms