RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ITGA2BP08514 1039 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 KLRC2P26717 231 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 MLH1P40692 756 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CLK1P49759 484 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 NAA20P61599 178 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 RPL7AP62424 266 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 METTL21CQ5VZV1 264 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 MIER2Q8N344 545 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 GTF3C2Q8WUA4 911 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SGF29Q96ES7 293 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 GJD4Q96KN9 370 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SH3GL1Q99961 368 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 TRIM54Q9BYV2 358 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SPAG4Q9NPE6 437 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PIN4Q9Y237 131 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 EIF3LQ9Y262 564 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 NDUFAF1Q9Y375 327 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CHD4Q14839 1912 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PHGDHO43175 533 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 MOCS2O96007 188 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 MYL3P08590 195 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CXCL8P10145 99 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 UNGP13051 313 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 NCAM1P13591 858 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 RPS12P25398 132 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PCSK1P29120 753 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 RAP1GDS1P52306 607 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PRKD1Q15139 912 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 LIPMQ5VYY2 423 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PACS1Q6VY07 963 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SVOPQ8N4V2 548 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 URGCPQ8TCY9 931 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PPP1R10Q96QC0 940 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SPATA16Q9BXB7 569 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 TXLNGYQ9BZA5 131 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 POMKQ9H5K3 350 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TMEM150BA6NC51 233 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TMEM247A6NEH6 219 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 ACKR2O00590 384 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 HDAC3O15379 428 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 KATNA1O75449 491 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 RHOBTB1O94844 696 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC166P0CW27 439 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 VCLP18206 1134 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PSME3P61289 254 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 LAMC2Q13753 1193 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 FAM98BQ52LJ0 330 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PSTKQ8IV42 348 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 C7orf43Q8WVR3 580 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 FICDQ9BVA6 458 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 IL22Q9GZX6 179 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 SARS2Q9NP81 518 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 MYOZ2Q9NPC6 264 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 NKX1-2Q9UD57 310 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 RNF112Q9ULX5 631 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 SLC8A2Q9UPR5 921 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 COQ4Q9Y3A0 265 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 IGLV3-22A0A075B6J6 115 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 RRN3P2A6NIE6 340 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 KLF11O14901 512 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 SNAP91O60641 907 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 VAPBO95292 243 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 CREB1P16220 341 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 HOXB8P17481 243 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 YWHAZP63104 245 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 ACSBG2Q5FVE4 666 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PPP1R15BQ5SWA1 713 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 ABRAXAS1Q6UWZ7 409 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 METTL7BQ6UX53 244 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TAS2R42Q7RTR8 314 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 C10orf107Q8IVU9 208 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 FAM9CQ8IZT9 166 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 KLHL23Q8NBE8 558 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 DIS3LQ8TF46 1054 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 MECRQ9BV79 373 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 HMG20AQ9NP66 347 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PRKAG3Q9UGI9 489 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 AP3M1Q9Y2T2 418 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 MTF2Q9Y483 593 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PHRF1Q9P1Y6 1649 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 BCLAF3A2AJT9 711 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TPST1O60507 370 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 C4BPAP04003 597 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 ADSLP30566 484 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 CCNG1P51959 295 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PKNOX1P55347 436 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 FASTKD3Q14CZ7 662 aaKnown RBP8.95□□□□□ -0.98
PCDH9-202ENST00000377865 PCSK7Q16549 785 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 FKBP1CQ5VVH2 108 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 LPCAT4Q643R3 524 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 UNC5AQ6ZN44 842 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 FAM183BPQ6ZVS7 135 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 NIPA2Q8N8Q9 360 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 GLMNQ92990 594 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 BORCS5Q969J3 196 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TBL1YQ9BQ87 522 aa8.95□□□□□ -0.98
PCDH9-202ENST00000377865 TEX12Q9BXU0 123 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms