RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TRIM67Q6ZTA4 783 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ARHGEF19Q8IW93 802 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TIFAQ96CG3 184 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SUGCTQ9HAC7 445 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 STOML2Q9UJZ1 356 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 AP5Z1O43299 807 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 IDH3BO43837 385 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 KCNK10P57789 538 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PRAMEP78395 509 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ARMCX4Q5H9R4 360 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 IL23RQ5VWK5 629 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 KLHL23Q8NBE8 558 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 RIT1Q92963 219 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 NUSAP1Q9BXS6 441 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PTCH2Q9Y6C5 1203 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 LYPLA1O75608 230 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 UBTFL6P0CB48 400 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SEC24CP53992 1094 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SNAPC2Q13487 334 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 KDELC2Q7Z4H8 507 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DPP9Q86TI2 863 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DNAAF5Q86Y56 855 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ZDHHC7Q9NXF8 308 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TK2O00142 265 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 NME5P56597 212 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MON1AQ86VX9 555 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PPHLN1Q8NEY8 458 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 IPMKQ8NFU5 416 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ECSITQ9BQ95 431 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 RPTORQ8N122 1335 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 HNRNPDQ14103 355 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 USP17L6PQ6QN14 398 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SLC7A4O43246 635 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF862O60290 1169 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 GRIA2P42262 883 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CACNA2D1P54289 1103 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CXCR4P61073 352 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 HLFQ16534 295 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TMEM110Q86TL2 294 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 BANPQ8N9N5 519 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 BHLHE22Q8NFJ8 381 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DLGAP2Q9P1A6 1054 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 NPHS1O60500 1241 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TRMUO75648 421 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 GH1P01241 217 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 BST2Q10589 180 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 APOBEC3HQ6NTF7 200 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 BHMTQ93088 406 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DYDC2Q96IM9 177 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ZC4H2Q9NQZ6 224 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 DENRO43583 198 aaKnown RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PRMT3O60678 531 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ANKMY2Q8IV38 441 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 THTPAQ9BU02 230 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TSPOAP1O95153 1857 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF263O14978 683 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CCNE2O96020 404 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 GNRH1P01148 92 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 MICU2Q8IYU8 434 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ATP6V0D2Q8N8Y2 350 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF333Q96JL9 665 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 TMED5Q9Y3A6 229 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 RIC1Q4ADV7 1423 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ASLP04424 464 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 IGSF9Q9P2J2 1179 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 ATRNL1Q5VV63 1379 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 SLC22A1O15245 554 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 PTPN11Q06124 597 aaPredicted RBP5.05□□□□□ -1.6
PCDH9-201ENST00000377861 OR6B2Q6IFH4 312 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CISHQ9NSE2 258 aa5.05□□□□□ -1.6
PCDH9-201ENST00000377861 CCDC154A6NI56 674 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SNRPB2P08579 225 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TGFBR2P37173 567 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FAM45BPQ6NSW5 357 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RTP4Q96DX8 246 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 VWA5AO00534 786 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 GLUD2P49448 558 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TMED2Q15363 201 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 OTUD5Q96G74 571 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TDRD5Q8NAT2 981 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ABCC13Q9NSE7 274 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PCDHGB3Q9Y5G1 929 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 BAG6P46379 1132 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 NDST2P52849 883 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ATXN3P54252 364 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ERVK-9P63128 1117 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FAM102AQ5T9C2 384 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HTR3CQ8WXA8 447 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 POPDC2Q9HBU9 364 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 GLP2RO95838 553 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PARP15Q460N3 678 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PPP1R16AQ96I34 528 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 MCM8Q9UJA3 840 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ALBP02768 609 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FAM200BP0CF97 657 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PFKLP17858 780 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CAPSLQ8WWF8 208 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ARL8AQ96BM9 186 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ADAMTS10Q9H324 1103 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms