RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 FBXO21O94952 628 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 ECHS1P30084 290 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 USP4Q13107 963 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 DGKZQ13574 1117 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 C16orf72Q14CZ0 275 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 DRICH1Q6PGQ1 229 aaPredicted RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 CLVS1Q8IUQ0 354 aaPredicted RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 C10orf107Q8IVU9 208 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 ZC3H3Q8IXZ2 948 aaKnown RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 MAB21L3Q8N8X9 362 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 EDEM1Q92611 657 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 PRDM12Q9H4Q4 367 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 EME2A4GXA9 379 aaPredicted RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 TNPO2O14787 897 aaKnown RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 CHRM3P20309 590 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 MMP14P50281 582 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 POU4F1Q01851 419 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 RFWD3Q6PCD5 774 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 TTC7BQ86TV6 843 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 SLC51AQ86UW1 340 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 LGMNQ99538 433 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 OSMRQ99650 979 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 C17orf80Q9BSJ5 609 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 THUMPD3Q9BV44 507 aaKnown RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 LATS2Q9NRM7 1088 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 TRHDEQ9UKU6 1024 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 SLC30A1Q9Y6M5 507 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 CLUHO75153 1309 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 MYPNQ86TC9 1320 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
VARS-215ENST00000375663 RGSL1A5PLK6 1076 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 HDAC3O15379 428 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 MAGEC1O60732 1142 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 TRIM16LQ309B1 348 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 LPCAT4Q643R3 524 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 SEC14L1Q92503 715 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 C7orf26Q96N11 449 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 SEPT3Q9UH03 358 aa17.17■□□□□ 0.34
VARS-215ENST00000375663 CDH2P19022 906 aaPredicted RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 DAB2P98082 770 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 PACS1Q6VY07 963 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 FAM162AQ96A26 154 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 TRIM54Q9BYV2 358 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 ATXN3LQ9H3M9 355 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 MAFO75444 373 aaPredicted RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 B3GAT3O94766 335 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 CD48P09326 243 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 CCDC130P13994 396 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 TRPC1P48995 793 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 CHRNB3Q05901 458 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 ACSBG2Q5FVE4 666 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 PTAR1Q7Z6K3 402 aaPredicted RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 CMC1Q7Z7K0 106 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 PLD3Q8IV08 490 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 ACE2Q9BYF1 805 aaPredicted RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 LHX5Q9H2C1 402 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 PCDH18Q9HCL0 1135 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 CASS4Q9NQ75 786 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 TNFSF13BQ9Y275 285 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 CLOCKO15516 846 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 ZNF862O60290 1169 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 PEX11AO75192 247 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 ERBB2P04626 1255 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 LYNP07948 512 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 EPHA3P29320 983 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 SAMD4BQ5PRF9 694 aaKnown RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 PSTKQ8IV42 348 aaKnown RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 C12orf29Q8N999 325 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 BANPQ8N9N5 519 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 FNIP1Q8TF40 1166 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 MARK4Q96L34 752 aa17.16■□□□□ 0.34
VARS-215ENST00000375663 APOBEC3GQ9HC16 384 aaKnown RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 SCHIP1Q9P0W5 487 aaPredicted RBP17.16■□□□□ 0.34
VARS-215ENST00000375663 MYO1GB0I1T2 1018 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 PMM2O15305 246 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 INPP4BO15327 924 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 FOLH1Q04609 750 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 ASIC4Q96FT7 647 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 DACH2Q96NX9 599 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 PAIP1Q9H074 479 aaKnown RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 WASF2Q9Y6W5 498 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 SPATA31C2B4DYI2 1134 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 APOA1P02647 267 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 FGFR3P22607 806 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 CRABP2P29373 138 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 DCTN2Q13561 401 aaKnown RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 SGO1Q5FBB7 561 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 ACBD5Q5T8D3 534 aaPredicted RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 CHSY1Q86X52 802 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 SLC22A9Q8IVM8 553 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 SLC25A23Q9BV35 468 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 RNF112Q9ULX5 631 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 ANKRD6Q9Y2G4 727 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 MYH15Q9Y2K3 1946 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 B4GALT5O43286 388 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 AKAP5P24588 427 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 ERO1BQ86YB8 467 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms