RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OSTNP61366 133 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 TRABD2AQ86V40 505 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CNTD1Q8N815 330 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 KIAA0895Q8NCT3 520 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 WBP11Q9Y2W2 641 aaKnown RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CYP2D6P10635 497 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CES1P23141 567 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 HTR7P34969 479 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ACLYP53396 1101 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 TUBA1BP68363 451 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 TGM3Q08188 693 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 BST2Q10589 180 aaKnown RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 RUNDC3AQ59EK9 446 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 N4BP2L1Q5TBK1 243 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 DRICH1Q6PGQ1 229 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 TUBA1AQ71U36 451 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CLNKQ7Z7G1 428 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ITFG1Q8TB96 612 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 RCOR3Q9P2K3 495 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 MROH1Q8NDA8 1641 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 DCCP43146 1447 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 PEX1O43933 1283 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 GLP2RO95838 553 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ERCC2P18074 760 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 RNF135Q8IUD6 432 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 RNF149Q8NC42 400 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 HTR3CQ8WXA8 447 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 EBF2Q9HAK2 575 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ARHGEF3Q9NR81 526 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ARIH1Q9Y4X5 557 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 SNPHO15079 494 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 LHX1P48742 406 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 OAZ1P54368 228 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ATP1A4Q13733 1029 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 DGKDQ16760 1214 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 FAM120BQ96EK7 910 aaKnown RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CHCHD6Q9BRQ6 235 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 C1orf21Q9H246 121 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 DNAJC18Q9H819 358 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ENTPD7Q9NQZ7 604 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 LEF1Q9UJU2 399 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 DIP2CQ9Y2E4 1556 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 PSMD12O00232 456 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 AKAP3O75969 853 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 GPIP06744 558 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CPA2P48052 419 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 KCNMB4Q86W47 210 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 FAM126BQ8IXS8 530 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ZFP42Q96MM3 310 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 TMEM9Q9P0T7 183 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 QSOX1O00391 747 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 RHOBTB1O94844 696 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 PROCP04070 461 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 NTRK1P04629 796 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 ICAM1P05362 532 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 IFNEQ86WN2 208 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 C12orf56Q8IXR9 622 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 OR8H2Q8N162 312 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 TMIEQ8NEW7 156 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 RUVBL2Q9Y230 463 aaKnown RBP10.4□□□□□ -0.75
PTCH1-204ENST00000375290 PCDHA11Q9Y5I1 949 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 SNRPB2P08579 225 aaKnown RBP10.4□□□□□ -0.75
PTCH1-204ENST00000375290 TFE3P19532 575 aaPredicted RBP10.4□□□□□ -0.75
PTCH1-204ENST00000375290 SLITRK2Q9H156 845 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.75
PTCH1-204ENST00000375290 MRASO14807 208 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 KCNH1O95259 989 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 KLK7P49862 253 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 MDH1BQ5I0G3 518 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 SH3BP5LQ7L8J4 393 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 FGD2Q7Z6J4 655 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 PROX1Q92786 737 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 MSH4O15457 936 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 RRM1P23921 792 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 ARHGEF7Q14155 803 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 NANOGNBQ7Z5D8 188 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 UBE2E3Q969T4 207 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 CDRT15Q96T59 188 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 GALNT8Q9NY28 637 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 KIF1AQ12756 1690 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 RGS14O43566 566 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 C15orf40Q8WUR7 153 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-204ENST00000375290 OSGEPQ9NPF4 335 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 WWOXQ9NZC7 414 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 ELK3P41970 407 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 RIPOR1Q6ZS17 1223 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-204ENST00000375290 C6orf62Q9GZU0 229 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-204ENST00000375290 AGAP1Q9UPQ3 857 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 TMED5Q9Y3A6 229 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 C3P01024 1663 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 SEC24AO95486 1093 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF484Q5JVG2 852 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 PPP1R15BQ5SWA1 713 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF420Q8TAQ5 688 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-204ENST00000375290 RNFT2Q96EX2 444 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms