RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ARSEP51690 589 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 MAP3K7CLP57077 242 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 NTHL1P78549 312 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 STAT4Q14765 748 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 MORF4L2Q15014 288 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 GALNTL6Q49A17 601 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 SLC30A9Q6PML9 568 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 C4orf50Q6ZRC1 276 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 TRPM8Q7Z2W7 1104 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 EXOC3L1Q86VI1 746 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 GBP7Q8N8V2 638 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 SPPL2BQ8TCT7 592 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ATXN2LQ8WWM7 1075 aaKnown RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 SMOQ99835 787 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 UBE2ZQ9H832 354 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ZWILCHQ9H900 591 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 PCDH9Q9HC56 1237 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 INTS9Q9NV88 658 aaKnown RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 PIK3R2O00459 728 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 RNF8O76064 485 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 RTN3O95197 1032 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 KDELR1P24390 212 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 MAGEA4P43358 317 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 PPARDQ03181 441 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 MAPRE1Q15691 268 aaKnown RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 GOLGA7BQ2TAP0 167 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ARHGAP17Q68EM7 881 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 BBS12Q6ZW61 710 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 TTC30AQ86WT1 665 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ZMIZ2Q8NF64 920 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 SLC35B2Q8TB61 432 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 SLC35F5Q8WV83 523 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ACSF2Q96CM8 615 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 TTC25Q96NG3 672 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 RBM15Q96T37 977 aaKnown RBP eCLIP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 SLC4A5Q9BY07 1137 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 NSRP1Q9H0G5 558 aaKnown RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 DNAJC17Q9NVM6 304 aaKnown RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ASNSD1Q9NWL6 643 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 CTNNAL1Q9UBT7 734 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 LGALS13Q9UHV8 139 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 MAGED2Q9UNF1 606 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 E7ENQ6 273 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 NRG2O14511 850 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 OAS1P00973 400 aaKnown RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 LRG1P02750 347 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 VIMP08670 466 aaKnown RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 SETSIPP0DME0 302 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 SP100P23497 879 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 ALDH1A3P47895 512 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 NCALDP61601 193 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 GPS1Q13098 491 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 TRNP1Q6NT89 227 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 TMEM184AQ6ZMB5 413 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 CLEC20AQ6ZU45 233 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 CCDC149Q6ZUS6 474 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 PCGF5Q86SE9 256 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 TMEM110Q86TL2 294 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 PRUNE1Q86TP1 453 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 HS6ST3Q8IZP7 471 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 EMC1Q8N766 993 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 STK32AQ8WU08 396 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 ARHGEF2Q92974 986 aaKnown RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 HLA-CQ95604 372 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 ZNF707Q96C28 371 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 CFAP57Q96MR6 1250 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 PWWP2AQ96N64 755 aa14.72□□□□□ -0.05
HMGA1-203ENST00000374116 HNRNPABQ99729 332 aaKnown RBP14.72□□□□□ -0.05
HMGA1-203ENST00000374116 C2CD4BA6NLJ0 364 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 E5RJQ4 531 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 SGK1O00141 431 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 DIAPH2O60879 1101 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 GABBR2O75899 941 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 PCK1P35558 622 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 PEX19P40855 299 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 RPL34P49207 117 aaKnown RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 ZNF143P52747 638 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 LBRQ14739 615 aaKnown RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 COL19A1Q14993 1142 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 GPRIN1Q7Z2K8 1008 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 GRASPQ7Z6J2 395 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 RIBC1Q8N443 379 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 GLIS1Q8NBF1 620 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 ST13P5Q8NFI4 369 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 CMASQ8NFW8 434 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 SCAMP5Q8TAC9 235 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 KHSRPQ92945 711 aaKnown RBP eCLIP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 SMARCD1Q96GM5 515 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 FUBP3Q96I24 572 aaKnown RBP eCLIP14.71□□□□□ -0.05
HMGA1-203ENST00000374116 MSLNLQ96KJ4 702 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 SFXN1Q9H9B4 322 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 SAMD15Q9P1V8 674 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 SHOC2Q9UQ13 582 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 L3MBTL1Q9Y468 752 aa14.71□□□□□ -0.05
HMGA1-203ENST00000374116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.71□□□□□ -0.06
HMGA1-203ENST00000374116 CST8O60676 142 aa14.71□□□□□ -0.06
HMGA1-203ENST00000374116 CDH16O75309 829 aa14.71□□□□□ -0.06
HMGA1-203ENST00000374116 ENDOD1O94919 500 aa14.71□□□□□ -0.06
HMGA1-203ENST00000374116 TRUB2O95900 331 aaKnown RBP14.71□□□□□ -0.06
HMGA1-203ENST00000374116 FAM200BP0CF97 657 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms