RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SMARCD1Q96GM5 515 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 GIT1Q9Y2X7 761 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 TSC2P49815 1807 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 C2orf71A6NGG8 1288 aa29.7■■■□□ 2.35
SSBP3-204ENST00000371320 PTPN3P26045 913 aa29.7■■■□□ 2.35
SSBP3-204ENST00000371320 RASAL3Q86YV0 1011 aa29.7■■■□□ 2.35
SSBP3-204ENST00000371320 SENP6Q9GZR1 1112 aaPredicted RBP29.7■■■□□ 2.35
SSBP3-204ENST00000371320 ARL8BQ9NVJ2 186 aa29.7■■■□□ 2.35
SSBP3-204ENST00000371320 RRN3Q9NYV6 651 aa29.7■■■□□ 2.35
SSBP3-204ENST00000371320 HHLA1C9JL84 531 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 NCAM2O15394 837 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 TOP3BO95985 862 aaKnown RBP29.7■■■□□ 2.34
SSBP3-204ENST00000371320 CHRNA1P02708 482 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 AMHP03971 560 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 POLBP06746 335 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 PCSK1P29120 753 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 RPL9P32969 192 aaKnown RBP29.7■■■□□ 2.34
SSBP3-204ENST00000371320 TEX44Q53QW1 395 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 CES4AQ5XG92 561 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 KYAT3Q6YP21 454 aaKnown RBP29.7■■■□□ 2.34
SSBP3-204ENST00000371320 AGMOQ6ZNB7 445 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 FAM13CQ8NE31 585 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 COLEC11Q9BWP8 271 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 EBF2Q9HAK2 575 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 KCNK4Q9NYG8 393 aa29.7■■■□□ 2.34
SSBP3-204ENST00000371320 F9P00740 461 aa29.69■■■□□ 2.34
SSBP3-204ENST00000371320 OCRLQ01968 901 aa29.69■■■□□ 2.34
SSBP3-204ENST00000371320 TRPV1Q8NER1 839 aa29.69■■■□□ 2.34
SSBP3-204ENST00000371320 EDEM1Q92611 657 aa29.69■■■□□ 2.34
SSBP3-204ENST00000371320 NSL1Q96IY1 281 aa29.69■■■□□ 2.34
SSBP3-204ENST00000371320 PAAF1Q9BRP4 392 aa29.69■■■□□ 2.34
SSBP3-204ENST00000371320 NOP53Q9NZM5 478 aaKnown RBP29.69■■■□□ 2.34
SSBP3-204ENST00000371320 ANP32DO95626 131 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 ALDOAP04075 364 aaKnown RBP29.68■■■□□ 2.34
SSBP3-204ENST00000371320 TIGD5Q53EQ6 642 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 STXBP5Q5T5C0 1151 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 PTCD3Q96EY7 689 aaKnown RBP29.68■■■□□ 2.34
SSBP3-204ENST00000371320 AGAP3Q96P47 875 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 TLE6Q9H808 572 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 TPP1O14773 563 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 PPIDQ08752 370 aaKnown RBP29.68■■■□□ 2.34
SSBP3-204ENST00000371320 RASSF3Q86WH2 238 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 ARID3BQ8IVW6 561 aaPredicted RBP29.68■■■□□ 2.34
SSBP3-204ENST00000371320 OR52K1Q8NGK4 314 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 PRR11Q96HE9 360 aaPredicted RBP29.68■■■□□ 2.34
SSBP3-204ENST00000371320 RHOBTB2Q9BYZ6 727 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 WDCPQ9H6R7 721 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 ZFATQ9P243 1243 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 PSAT1Q9Y617 370 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 RPS6KL1Q9Y6S9 549 aa29.68■■■□□ 2.34
SSBP3-204ENST00000371320 ZNF638Q14966 1978 aaKnown RBP29.68■■■□□ 2.34
SSBP3-204ENST00000371320 CCDC22O60826 627 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 IRX4P78413 519 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 OLIG2Q13516 323 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 UPP1Q16831 310 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 ACCSLQ4AC99 568 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 CES3Q6UWW8 571 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 CRLF3Q8IUI8 442 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 NPWQ8N729 165 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 BRD8Q9H0E9 1235 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 ZNF395Q9H8N7 513 aaPredicted RBP29.67■■■□□ 2.34
SSBP3-204ENST00000371320 TXNDC16Q9P2K2 825 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 MCM8Q9UJA3 840 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.67■■■□□ 2.34
SSBP3-204ENST00000371320 GPR182O15218 404 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 KRT72Q14CN4 511 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 SPANXN3Q5MJ09 141 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 BHLHA9Q7RTU4 235 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 ATP2A3Q93084 1043 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 MYLPFQ96A32 169 aa29.67■■■□□ 2.34
SSBP3-204ENST00000371320 FCHO1O14526 889 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 SNNO75324 88 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-204ENST00000371320 AP2A1O95782 977 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 ITGA2BP08514 1039 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 ERVK-10P10266 1014 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 ODC1P11926 461 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 MX2P20592 715 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 PDE1BQ01064 536 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 STX3Q13277 289 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 PDE1CQ14123 709 aaPredicted RBP29.66■■■□□ 2.34
SSBP3-204ENST00000371320 SMAD1Q15797 465 aaKnown RBP29.66■■■□□ 2.34
SSBP3-204ENST00000371320 INTS6LQ5JSJ4 861 aaKnown RBP29.66■■■□□ 2.34
SSBP3-204ENST00000371320 EPAS1Q99814 870 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 GORASP1Q9BQQ3 440 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 CSNK1G1Q9HCP0 422 aa29.66■■■□□ 2.34
SSBP3-204ENST00000371320 GLRA3O75311 464 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 CXCR3P49682 368 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 C16orf46Q6P387 395 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 SERINC5Q86VE9 423 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 PPP1R14CQ8TAE6 165 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 CERS2Q96G23 380 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 BTBD10Q9BSF8 475 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 TKTL2Q9H0I9 626 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 LRRC40Q9H9A6 602 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 AGO3Q9H9G7 860 aaKnown RBP29.65■■■□□ 2.34
SSBP3-204ENST00000371320 IL1RAPL1Q9NZN1 696 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 OR12D3Q9UGF7 316 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 SNX10Q9Y5X0 201 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 ZBTB24O43167 697 aaPredicted RBP29.65■■■□□ 2.34
SSBP3-204ENST00000371320 MTSS1O43312 755 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms